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The map label for this gene is yvrH [H]

Identifier: 218234767

GI number: 218234767

Start: 1142805

End: 1143509

Strand: Reverse

Name: yvrH [H]

Synonym: BCB4264_A1173

Alternate gene names: 218234767

Gene position: 1143509-1142805 (Counterclockwise)

Preceding gene: 218235213

Following gene: 218234007

Centisome position: 21.1

GC content: 36.17

Gene sequence:

>705_bases
ATGTACCAAGCAAATATTTTACTCGTTGATGATGAAACAGCAATTTTACAATTACTAACTACCATTCTTGAAAAAGAAGG
CTTTTCTCATATTACAACTGCAACATCAGCTGAAATAGCTTTATCTCTAACTAAGCAAAACAATTACGATTTAATTATTT
TAGATGTAATGCTTCCTGGACAATCTGGTTTTGATATTTGTCCAATCATTCGCCAACAAACAGATTGTCCAATTTTCTTC
CTATCAGCAAAAGCATCTGATTTAGATAAAATATCCGGATTTTCATACGGTGCAGATGATTATATTACGAAGCCCTTTAA
TCCATTAGAAGTAGTAGCACGCATGAAAGCACAGCTTCGGAGACATATGAAACAAACCATACCACACGAACAAAAATCAC
ACTCGATTTCATTTGGAAGATTTGAAATTGATCAGCACTCTGCAGAACTAACAGTAGATGGGCACATTGTCGAATGCTCC
GCTCAACTCTTTCAACTACTACTCTTCTTTTGCGAGAATCCGAACTACGTATTTTCGAAAGAGGAAATATACGAAAAAGT
TTGGGGAGCACCTGCCTATAATGGCGATGACAACACTGTTATGGTCCACATTCGAAAACTACGTGAAAAAATTGAACATG
ATCCAAGTAAACCAGAATATATAAAAACCGTTCGCGGCCTTGGTTATAAGTTCGTTACAAAGTAG

Upstream 100 bases:

>100_bases
ATTCTTAATTTTTTGCGAAAGAAAACCTTAAAATTTCCTTAAAAATTCCATAAGTTACAAAATGATGATATGATATTCGA
GGAAATTAGGAGGGATGTTT

Downstream 100 bases:

>100_bases
GGTGACGATATGAATTTTAATAAACGACTTATTATTCAATTTATCATGCAACACGTTTTTGTTTTAGTTACATTACTTAT
CGCTGTAGTTGCTGCTTTTA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MYQANILLVDDETAILQLLTTILEKEGFSHITTATSAEIALSLTKQNNYDLIILDVMLPGQSGFDICPIIRQQTDCPIFF
LSAKASDLDKISGFSYGADDYITKPFNPLEVVARMKAQLRRHMKQTIPHEQKSHSISFGRFEIDQHSAELTVDGHIVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWGAPAYNGDDNTVMVHIRKLREKIEHDPSKPEYIKTVRGLGYKFVTK

Sequences:

>Translated_234_residues
MYQANILLVDDETAILQLLTTILEKEGFSHITTATSAEIALSLTKQNNYDLIILDVMLPGQSGFDICPIIRQQTDCPIFF
LSAKASDLDKISGFSYGADDYITKPFNPLEVVARMKAQLRRHMKQTIPHEQKSHSISFGRFEIDQHSAELTVDGHIVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWGAPAYNGDDNTVMVHIRKLREKIEHDPSKPEYIKTVRGLGYKFVTK
>Mature_234_residues
MYQANILLVDDETAILQLLTTILEKEGFSHITTATSAEIALSLTKQNNYDLIILDVMLPGQSGFDICPIIRQQTDCPIFF
LSAKASDLDKISGFSYGADDYITKPFNPLEVVARMKAQLRRHMKQTIPHEQKSHSISFGRFEIDQHSAELTVDGHIVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWGAPAYNGDDNTVMVHIRKLREKIEHDPSKPEYIKTVRGLGYKFVTK

Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=35.0649350649351, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=36.3247863247863, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786599, Length=236, Percent_Identity=36.0169491525424, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=33.4801762114537, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=34.3478260869565, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=32.0175438596491, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=32.7586206896552, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=33.4782608695652, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32.8888888888889, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1790552, Length=236, Percent_Identity=31.7796610169492, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=29.0748898678414, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789402, Length=235, Percent_Identity=31.9148936170213, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=29.9559471365639, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26666; Mature: 26666

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQANILLVDDETAILQLLTTILEKEGFSHITTATSAEIALSLTKQNNYDLIILDVMLPG
CCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCEEEEEEEECC
QSGFDICPIIRQQTDCPIFFLSAKASDLDKISGFSYGADDYITKPFNPLEVVARMKAQLR
CCCCCCCHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RHMKQTIPHEQKSHSISFGRFEIDQHSAELTVDGHIVECSAQLFQLLLFFCENPNYVFSK
HHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCEEECH
EEIYEKVWGAPAYNGDDNTVMVHIRKLREKIEHDPSKPEYIKTVRGLGYKFVTK
HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCC
>Mature Secondary Structure
MYQANILLVDDETAILQLLTTILEKEGFSHITTATSAEIALSLTKQNNYDLIILDVMLPG
CCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCEEEEEEEECC
QSGFDICPIIRQQTDCPIFFLSAKASDLDKISGFSYGADDYITKPFNPLEVVARMKAQLR
CCCCCCCHHHHCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RHMKQTIPHEQKSHSISFGRFEIDQHSAELTVDGHIVECSAQLFQLLLFFCENPNYVFSK
HHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCEEECH
EEIYEKVWGAPAYNGDDNTVMVHIRKLREKIEHDPSKPEYIKTVRGLGYKFVTK
HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]