Click here to switch to the map view.

The map label for this gene is tepA [H]

Identifier: 218234620

GI number: 218234620

Start: 3813134

End: 3813883

Strand: Reverse

Name: tepA [H]

Synonym: BCB4264_A3895

Alternate gene names: 218234620

Gene position: 3813883-3813134 (Counterclockwise)

Preceding gene: 218234241

Following gene: 218234123

Centisome position: 70.38

GC content: 38.13

Gene sequence:

>750_bases
ATGACAGAACGTGATCGATATACAAATGAAGAAAAAGAAGCTGAGCCAAAAGAAGCTGGAAAAGAGGCTTCAATAGTTGA
AAAAATTCAACAGCTTGGACAGACAAATGTACCACAGATGAATGAATCACGTATTCATTGTTTAACGATTATCGGACAAG
TGGAAGGTCATGTTCAATTACCACCGCAAAATAAAACAACAAAATATGAGCATATCATTCCGCAAATTGTTGCGATTGAA
CAAAATCCGAAAATTGAAGGTTTGCTTTTAATATTAAATACAGTTGGAGGTGACGTTGAAGCTGGGCTAGCAATTTCTGA
AATGGTAGCTTCACTTTCAAAACCAACAGTATCTCTAGTTTTAGGTGGGGGACATTCCATCGGTGTACCGATTGCTGTTT
CTACTGACTATTCGTTTATTGCGGAAACTGCGACGATGACAATTCATCCAATTCGTTTAACAGGTCTTGTCATAGGTGTG
CCACAAACATTTGAGTATTTGGATAAGATGCAAGAAAGAGTCATTCGTTTTGTGACGAAGCACTCGAAAGTAACAGAAGA
TCGTTTTAAAGAGCTTATGTTTGCGAAAGGAAATTTAACGCGAGATATTGGGACGAATGTAATTGGTGGGGATGCAGTAA
AGTACGGTCTTATAGATGATGTCGGCGGTATTGGAAATGCGATTCGAAAATTAAACGAATTAATAGATGTTCGTGCGGAA
GATAGTACAGAAGGGACAATGCTACAATGA

Upstream 100 bases:

>100_bases
AAGGTCACCCTTATGGGTGATCTTTTTTCTTTTTAACCCCATCGAATGAAATTTATAACTTAAGAAATAATAGTTATATA
CGAGTGAAAGGGGATGCGAA

Downstream 100 bases:

>100_bases
TTTTATATACAATTATGCCAGAGCAACTTGTGTATCCGGTCGATTATTCACAATGTGAAAGTCAAAAAGTTGTAAATATA
AATGGTGTGGAATTAATGGT

Product: clp protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTERDRYTNEEKEAEPKEAGKEASIVEKIQQLGQTNVPQMNESRIHCLTIIGQVEGHVQLPPQNKTTKYEHIIPQIVAIE
QNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGVPIAVSTDYSFIAETATMTIHPIRLTGLVIGV
PQTFEYLDKMQERVIRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDVGGIGNAIRKLNELIDVRAE
DSTEGTMLQ

Sequences:

>Translated_249_residues
MTERDRYTNEEKEAEPKEAGKEASIVEKIQQLGQTNVPQMNESRIHCLTIIGQVEGHVQLPPQNKTTKYEHIIPQIVAIE
QNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGVPIAVSTDYSFIAETATMTIHPIRLTGLVIGV
PQTFEYLDKMQERVIRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDVGGIGNAIRKLNELIDVRAE
DSTEGTMLQ
>Mature_248_residues
TERDRYTNEEKEAEPKEAGKEASIVEKIQQLGQTNVPQMNESRIHCLTIIGQVEGHVQLPPQNKTTKYEHIIPQIVAIEQ
NPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGVPIAVSTDYSFIAETATMTIHPIRLTGLVIGVP
QTFEYLDKMQERVIRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDVGGIGNAIRKLNELIDVRAED
STEGTMLQ

Specific function: Required for efficient translocation of pre-proteins across the membrane [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family. TepA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: NA

Molecular weight: Translated: 27246; Mature: 27114

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERDRYTNEEKEAEPKEAGKEASIVEKIQQLGQTNVPQMNESRIHCLTIIGQVEGHVQL
CCCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEC
PPQNKTTKYEHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLV
CCCCCCCHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
LGGGHSIGVPIAVSTDYSFIAETATMTIHPIRLTGLVIGVPQTFEYLDKMQERVIRFVTK
EECCCCCCEEEEEECCHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
HSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDVGGIGNAIRKLNELIDVRAE
HCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
DSTEGTMLQ
CCCCCCCCC
>Mature Secondary Structure 
TERDRYTNEEKEAEPKEAGKEASIVEKIQQLGQTNVPQMNESRIHCLTIIGQVEGHVQL
CCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEC
PPQNKTTKYEHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLV
CCCCCCCHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
LGGGHSIGVPIAVSTDYSFIAETATMTIHPIRLTGLVIGVPQTFEYLDKMQERVIRFVTK
EECCCCCCEEEEEECCHHHHHHHHEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
HSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDVGGIGNAIRKLNELIDVRAE
HCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
DSTEGTMLQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3129532; 10455123 [H]