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The map label for this gene is 218234475

Identifier: 218234475

GI number: 218234475

Start: 1446802

End: 1447080

Strand: Reverse

Name: 218234475

Synonym: BCB4264_A1512

Alternate gene names: NA

Gene position: 1447080-1446802 (Counterclockwise)

Preceding gene: 218233711

Following gene: 218231839

Centisome position: 26.7

GC content: 39.43

Gene sequence:

>279_bases
ATGAAAGAAAAGAATGAAAAGATGAACAATAAAAATAAAGGAAAAGTATTTTATGGTAATGATTGTTGCGAAGTAAGAGC
ATGTAGCCATATTAACATCCCTAAGTCAGAACTTACAGAATTTGTTAGACTTCTTCAAACTCTTGGTCAAGCTATTCTAG
TTCAATATGGATCTGGTTGCCTAGGCGGAGGAACTACGGGGACTACTGGTGCTCAAGGGCCTCAACAAGGACCTGCGGGC
GATACAACTGCGACACTATCTGTCTTCCGAATTTACTAA

Upstream 100 bases:

>100_bases
TCTAGGTGGGCCAATTTCTTATTTTTTTAGAAATGGTAGTTTGTCCATCACGAATTTAGTATAAATTTCATTTTAATATA
TAGTAATGACTAATGATTCT

Downstream 100 bases:

>100_bases
CCACAATTTCCGAAAATATTTTGGGAGGACTAAGCACATTTATAAGTAATAGATGTGATTTTGATTGACTATTAAATCTC
TCTTTTAATAAAAAGGAGCA

Product: group-specific protein

Products: NA

Alternate protein names: Collagen-Like Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKEKNEKMNNKNKGKVFYGNDCCEVRACSHINIPKSELTEFVRLLQTLGQAILVQYGSGCLGGGTTGTTGAQGPQQGPAG
DTTATLSVFRIY

Sequences:

>Translated_92_residues
MKEKNEKMNNKNKGKVFYGNDCCEVRACSHINIPKSELTEFVRLLQTLGQAILVQYGSGCLGGGTTGTTGAQGPQQGPAG
DTTATLSVFRIY
>Mature_92_residues
MKEKNEKMNNKNKGKVFYGNDCCEVRACSHINIPKSELTEFVRLLQTLGQAILVQYGSGCLGGGTTGTTGAQGPQQGPAG
DTTATLSVFRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9843; Mature: 9843

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKNEKMNNKNKGKVFYGNDCCEVRACSHINIPKSELTEFVRLLQTLGQAILVQYGSGC
CCCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LGGGTTGTTGAQGPQQGPAGDTTATLSVFRIY
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKEKNEKMNNKNKGKVFYGNDCCEVRACSHINIPKSELTEFVRLLQTLGQAILVQYGSGC
CCCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LGGGTTGTTGAQGPQQGPAGDTTATLSVFRIY
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA