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The map label for this gene is ypoC [H]

Identifier: 218233830

GI number: 218233830

Start: 1529402

End: 1529920

Strand: Direct

Name: ypoC [H]

Synonym: BCB4264_A1604

Alternate gene names: 218233830

Gene position: 1529402-1529920 (Clockwise)

Preceding gene: 218233114

Following gene: 218235837

Centisome position: 28.22

GC content: 30.83

Gene sequence:

>519_bases
ATGGAGCGAGTTATAGAAATACCGGAAGAATTTCACTGTTTACCATTTTTTAAAGAAAGTGTAAATTTAATTAAGTATCA
TACAGACAATTCTTTTGAAGAGATAATACAAAATACTTACTTTATATTTGATATCGAAAGACAGTATGAGCCGTGGAAGG
AAATTGAAAACAGCATTCCAGCGATGTTGAATGTATGGAAAAATAAGCATGAAGACATTGCTATACTGTTTCGAAATAGA
AATAAGCAAGAGGCTGAGGGACCAATGATTCTTTTTGCAGCTCACTTGTTATCGGTTGTCTATTGGCTAAATGAACAACC
TGTTCATAGTTTGAATGAAATGCAAATAAATACGAATAAATTAAAAGTGCAACCTGTTAATTTTATGGAAAGATATTCAT
TCGTTATAAAGAAACCGAGTAATTATCATTCTTATATTCAATTAGCGCAGTTGTATATCGAAATAGAAAAGCTGTATGTA
AAGAAAATGATAACAAAAAAGAAGTCCGCTTCTCGTTAA

Upstream 100 bases:

>100_bases
TGGACGTTATCACTGTAAAGCACAACGCCCACAATGTGAGGAGTGCAGACTGTTAGAAGTATGTCGTGAAGGAAAGAAGC
GAATGAAGGTGAAATAAAGG

Downstream 100 bases:

>100_bases
GAGAAACGGACTTCTTTTTTTGTATATTAGGACTCTGTTGTAACAACAGCACCGTCTGCGTGAGGTGTATCTCCTCCGGT
ATTTTGGTGTTGCTGTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MERVIEIPEEFHCLPFFKESVNLIKYHTDNSFEEIIQNTYFIFDIERQYEPWKEIENSIPAMLNVWKNKHEDIAILFRNR
NKQEAEGPMILFAAHLLSVVYWLNEQPVHSLNEMQINTNKLKVQPVNFMERYSFVIKKPSNYHSYIQLAQLYIEIEKLYV
KKMITKKKSASR

Sequences:

>Translated_172_residues
MERVIEIPEEFHCLPFFKESVNLIKYHTDNSFEEIIQNTYFIFDIERQYEPWKEIENSIPAMLNVWKNKHEDIAILFRNR
NKQEAEGPMILFAAHLLSVVYWLNEQPVHSLNEMQINTNKLKVQPVNFMERYSFVIKKPSNYHSYIQLAQLYIEIEKLYV
KKMITKKKSASR
>Mature_172_residues
MERVIEIPEEFHCLPFFKESVNLIKYHTDNSFEEIIQNTYFIFDIERQYEPWKEIENSIPAMLNVWKNKHEDIAILFRNR
NKQEAEGPMILFAAHLLSVVYWLNEQPVHSLNEMQINTNKLKVQPVNFMERYSFVIKKPSNYHSYIQLAQLYIEIEKLYV
KKMITKKKSASR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20745; Mature: 20745

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVIEIPEEFHCLPFFKESVNLIKYHTDNSFEEIIQNTYFIFDIERQYEPWKEIENSIP
CCCCCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCHHHHHHHCCH
AMLNVWKNKHEDIAILFRNRNKQEAEGPMILFAAHLLSVVYWLNEQPVHSLNEMQINTNK
HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEECCCE
LKVQPVNFMERYSFVIKKPSNYHSYIQLAQLYIEIEKLYVKKMITKKKSASR
EEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MERVIEIPEEFHCLPFFKESVNLIKYHTDNSFEEIIQNTYFIFDIERQYEPWKEIENSIP
CCCCCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCHHHHHHHCCH
AMLNVWKNKHEDIAILFRNRNKQEAEGPMILFAAHLLSVVYWLNEQPVHSLNEMQINTNK
HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEECCCE
LKVQPVNFMERYSFVIKKPSNYHSYIQLAQLYIEIEKLYVKKMITKKKSASR
EEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 7814321; 9384377 [H]