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The map label for this gene is glnP [H]

Identifier: 218233063

GI number: 218233063

Start: 669357

End: 670001

Strand: Direct

Name: glnP [H]

Synonym: BCB4264_A0678

Alternate gene names: 218233063

Gene position: 669357-670001 (Clockwise)

Preceding gene: 218234515

Following gene: 218236026

Centisome position: 12.35

GC content: 33.8

Gene sequence:

>645_bases
ATGGATTTTAAGGGAGCAATTACAGGAGATCATATTCTCTTTTTATTAAAAGGATTACTTATAACGTTAGAGGTAGCGCT
CGTAGCAATTATACTTAGTTTTATTATTGGTAGCGTAATAGGAATATTGCGCTACATGAAAATCCCTGTCGTCTCACAAA
TATTAGGAATTGTCGTTGAAGTGATTCGAAACTTACCACTACTTTTAATTATATTTTTCACGTATTTTGCACTTCCAGAA
GCAGGATTGAAATTAGAAATTATAACAGCTGTAATTGTTGCTTTAACAATATTTGAAGCAGCAATGATATCTGAAATTGT
TCGAAGTGGCCTATTATCTATTGAAAAAGGACAGATTGAGGCCGCAAGATCTTCAGGATTAACGTATGTTCAAGCACTTT
GGCATATTATTTTACCGCAAGCATTAAGAAGAATGGTCCCGCCGCTTGTTAGTCAGTTTATTTCATTGCTGAAAGATACA
TCACTAGCAGTCGTTATATCACTGCCAGAGCTTATGCATAATGCTCAAATTATTAGCGGACAAAATGTGAATTATACGAT
TCCAACGTTTATAGTAGTAGCTTGTATGTATTTTATCGTAAATTATAGTTTATCAATTTTATCGAGAAGGTTAGAACTCC
GTTGA

Upstream 100 bases:

>100_bases
CGTCTATATATTTGTCGGGATGTTTTATTTAATATTAACAATTCCGCTCAGTATGCTAGTGCGTTATTTAGAAAAACGCT
TAGCAAAGGAGGCGGTATAA

Downstream 100 bases:

>100_bases
CTCTTACAATATATGTAAGGGTTTTTTCCTTGTTTCTCCTTATTTTCCTCTAAATAGAATCTAAATCTTGCGATAATTCG
ATTTTTTATATTATTTTATC

Product: amino acid ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDFKGAITGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPLLLIIFFTYFALPE
AGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDT
SLAVVISLPELMHNAQIISGQNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR

Sequences:

>Translated_214_residues
MDFKGAITGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPLLLIIFFTYFALPE
AGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDT
SLAVVISLPELMHNAQIISGQNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR
>Mature_214_residues
MDFKGAITGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPLLLIIFFTYFALPE
AGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDT
SLAVVISLPELMHNAQIISGQNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=35.2941176470588, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=36.1111111111111, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=34.7619047619048, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=32.6732673267327, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786874, Length=207, Percent_Identity=28.5024154589372, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=36.5853658536585, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788645, Length=220, Percent_Identity=28.1818181818182, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1787087, Length=218, Percent_Identity=22.9357798165138, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787086, Length=210, Percent_Identity=24.7619047619048, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788646, Length=192, Percent_Identity=23.4375, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23645; Mature: 23645

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKGAITGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRNLPLLLIIFFTYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIE
HHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIISG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHHHCCHHCCC
QNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFKGAITGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRNLPLLLIIFFTYFALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIE
HHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIISG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHHHCCHHCCC
QNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]