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The map label for this gene is dra [H]

Identifier: 218232917

GI number: 218232917

Start: 1803601

End: 1804272

Strand: Direct

Name: dra [H]

Synonym: BCB4264_A1895

Alternate gene names: 218232917

Gene position: 1803601-1804272 (Clockwise)

Preceding gene: 218232399

Following gene: 218234974

Centisome position: 33.28

GC content: 37.95

Gene sequence:

>672_bases
ATGAACATTGCAAAGTTAATTGACCATACAATTTTAAAAGCTAATTCTACAAAAGAAGATGTTATGAAAGTAATCGAAGA
AGCAAAGGAATATAAATTCGCTTCTGTTTGTATTAACCCAACATGGGTAAAATTAGCGGCTGATGAACTAGCTGGACATG
ATGTAGATGTTTGTACTGTAATCGGTTTCCCATTAGGAGCAAGCACGACTGAAACAAAAGCATTTGAAACAAAAGATGCT
ATTGCAAAAGGTGCAACTGAAGTTGATATGGTAATCAACGTAGGCGCTTTAAAAGATGGTGACAACGAACTTGTTGAAAA
AGACATTTATGAAGTAGTACAAGCAGCAAAAGGAAAAGCTCTTGTAAAAGTAATCATTGAAACTTGTCTATTAACAGATG
AAGAGAAAGTACGTGCTTGTGAATTATCAGTAAAAGCTGGTGCTGATTTCGTAAAAACTTCAACCGGATTCTCAACTGGC
GGAGCAACTGCTGAAGATATCGCATTAATGCGTAAAACAGTAGGACCAAACGTTGGTGTAAAAGCATCTGGCGGTGTTCG
TACACGTGAGGATGCAGACAAAATGGTAGCTGCTGGAGCTTCTCGCGTTGGAGCAAGTGCTAGTGTTGCAATCGTATTAA
ATGATGCAAAAGGTGCTACAGATAACTACTAA

Upstream 100 bases:

>100_bases
TTACTTTTAAAAAAGAATGAACAAAATTTCAAAAGTATATTTACATTTGTTCAACTAAGAGTTAGAATGAAGTTGTTAAA
AGATATGAGGAGTGAAGATA

Downstream 100 bases:

>100_bases
TCGATAAAAGATTAAAGCAATAGATATACATTTAAAGTATATCTATTGCTTTAATAATTGAAAAAAATGTAAGCGGATAC
GAATGGGAGGAAACGGCTTA

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNIAKLIDHTILKANSTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTVIGFPLGASTTETKAFETKDA
IAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKALVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTG
GATAEDIALMRKTVGPNVGVKASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY

Sequences:

>Translated_223_residues
MNIAKLIDHTILKANSTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTVIGFPLGASTTETKAFETKDA
IAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKALVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTG
GATAEDIALMRKTVGPNVGVKASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY
>Mature_223_residues
MNIAKLIDHTILKANSTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTVIGFPLGASTTETKAFETKDA
IAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKALVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTG
GATAEDIALMRKTVGPNVGVKASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116063554, Length=213, Percent_Identity=31.4553990610329, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1790841, Length=214, Percent_Identity=39.7196261682243, Blast_Score=105, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17533015, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI19922098, Length=176, Percent_Identity=34.0909090909091, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915
- InterPro:   IPR022979 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 23369; Mature: 23369

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAKLIDHTILKANSTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTV
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCEEEEEHHHHCCCCCCEEEE
IGFPLGASTTETKAFETKDAIAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKA
ECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
LVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTGGATAEDIALMRKTVGPNVGV
HHHHHHHHHHCCCHHHHHHEEEEHHCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCE
KASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY
ECCCCCCCHHHHHHHHHHCHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNIAKLIDHTILKANSTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTV
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCEEEEEHHHHCCCCCCEEEE
IGFPLGASTTETKAFETKDAIAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKA
ECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
LVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTGGATAEDIALMRKTVGPNVGV
HHHHHHHHHHCCCHHHHHHEEEEHHCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCE
KASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY
ECCCCCCCHHHHHHHHHHCHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA