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The map label for this gene is yobV [H]

Identifier: 218232869

GI number: 218232869

Start: 2710521

End: 2711465

Strand: Reverse

Name: yobV [H]

Synonym: BCB4264_A2821

Alternate gene names: 218232869

Gene position: 2711465-2710521 (Counterclockwise)

Preceding gene: 218233726

Following gene: 218234091

Centisome position: 50.04

GC content: 32.59

Gene sequence:

>945_bases
ATGTCTAAAACTAAACGTATCATTAGAATTATGCTGGCATTAAACAATAATAATTCCATTACTGCAAAGGAACTTGCTAA
ATCCGAAGGAGTCTCAGAGAGAACAATCCTCCGAGATATACAGGAGCTAAGTGAAATTTACTTTCCAGTCTATTCAGAAA
GAGGTAGAAATGGAGGATTTAGTACACTAAAAAATAAAATGATCCCTCCTATTTGGTTTAGTGAGGATGAAATAATAGCT
TTATTTTTTGCAATAGATGCCATGCAATATGTTGGCGCCACTCCTTTTTCTACTTCATATAATGTAATTTTAAATAAACT
GTTCAATATGATTCCTCAGGAAACTTCCGATGCAATTGAGAATACTAGAGACAAAATCTTGATGTGGCAACCAAATATTA
AAGTAGATAAAAGGGTCCTAAGAAACCTTTATGATGCATCTGTAGAAGAGAAAACTGTTAATATCTTATATGAAACAACT
GAAGATGAAATCTATAGAGAGATAGAACTTATGGGCTTATACGTATATAACGGGTATTGGTATTGTCCCGCTTACTGTAG
AATGAGAAGAGGCATAAGGCTTTTCAGAGTAGATCGAATAAAAAAAACAATTATTAATTCTACTTCTCATTCCACTAATG
TCCATTCGAATGTTAAAGAATGGCTGTATTCTGAGTGTGAATCTAATCTCATAAAGCTCGAAGTGAGTTTAAGCAAAGAA
GGAAAAAGAAAAGCTGAGAGCATATCATGGTTAAGAGATAATATGGAATACAATTCAGATGGAACCGCGAAAATAACAAA
GAATATTAACCCTTCAGAAGAGTGGTTTTATGTTGAACTACTTTGGAATATTGGACAAGAAGCAGAAATAATAGAACCTG
ATTGTATAAAAAATAAGCTTATTGAAAGGGCTAAATCAGTGATAACGAAATATAATGACTTTTAG

Upstream 100 bases:

>100_bases
ATGGTATTCATTTTTGCATTAGCCTCCTTCACTTAGTTTAAAATTAGCTTATAATATAAATAAGACAGATTTTGTCATAT
TTTATGAAAAAGGTGATTAA

Downstream 100 bases:

>100_bases
CTTAATTTTATACTACTAGAAAGGATCACTGCATAGATAATTGTTCCTTTATTCAACTAAAGGGTGCGATTGTGGCATAA
AATAGATAAAAAATAATCAA

Product: hypothetical DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSKTKRIIRIMLALNNNNSITAKELAKSEGVSERTILRDIQELSEIYFPVYSERGRNGGFSTLKNKMIPPIWFSEDEIIA
LFFAIDAMQYVGATPFSTSYNVILNKLFNMIPQETSDAIENTRDKILMWQPNIKVDKRVLRNLYDASVEEKTVNILYETT
EDEIYREIELMGLYVYNGYWYCPAYCRMRRGIRLFRVDRIKKTIINSTSHSTNVHSNVKEWLYSECESNLIKLEVSLSKE
GKRKAESISWLRDNMEYNSDGTAKITKNINPSEEWFYVELLWNIGQEAEIIEPDCIKNKLIERAKSVITKYNDF

Sequences:

>Translated_314_residues
MSKTKRIIRIMLALNNNNSITAKELAKSEGVSERTILRDIQELSEIYFPVYSERGRNGGFSTLKNKMIPPIWFSEDEIIA
LFFAIDAMQYVGATPFSTSYNVILNKLFNMIPQETSDAIENTRDKILMWQPNIKVDKRVLRNLYDASVEEKTVNILYETT
EDEIYREIELMGLYVYNGYWYCPAYCRMRRGIRLFRVDRIKKTIINSTSHSTNVHSNVKEWLYSECESNLIKLEVSLSKE
GKRKAESISWLRDNMEYNSDGTAKITKNINPSEEWFYVELLWNIGQEAEIIEPDCIKNKLIERAKSVITKYNDF
>Mature_313_residues
SKTKRIIRIMLALNNNNSITAKELAKSEGVSERTILRDIQELSEIYFPVYSERGRNGGFSTLKNKMIPPIWFSEDEIIAL
FFAIDAMQYVGATPFSTSYNVILNKLFNMIPQETSDAIENTRDKILMWQPNIKVDKRVLRNLYDASVEEKTVNILYETTE
DEIYREIELMGLYVYNGYWYCPAYCRMRRGIRLFRVDRIKKTIINSTSHSTNVHSNVKEWLYSECESNLIKLEVSLSKEG
KRKAESISWLRDNMEYNSDGTAKITKNINPSEEWFYVELLWNIGQEAEIIEPDCIKNKLIERAKSVITKYNDF

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36750; Mature: 36619

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTKRIIRIMLALNNNNSITAKELAKSEGVSERTILRDIQELSEIYFPVYSERGRNGGF
CCHHHHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
STLKNKMIPPIWFSEDEIIALFFAIDAMQYVGATPFSTSYNVILNKLFNMIPQETSDAIE
HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
NTRDKILMWQPNIKVDKRVLRNLYDASVEEKTVNILYETTEDEIYREIELMGLYVYNGYW
CCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHEEEEEECCEE
YCPAYCRMRRGIRLFRVDRIKKTIINSTSHSTNVHSNVKEWLYSECESNLIKLEVSLSKE
ECHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
GKRKAESISWLRDNMEYNSDGTAKITKNINPSEEWFYVELLWNIGQEAEIIEPDCIKNKL
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHH
IERAKSVITKYNDF
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SKTKRIIRIMLALNNNNSITAKELAKSEGVSERTILRDIQELSEIYFPVYSERGRNGGF
CHHHHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
STLKNKMIPPIWFSEDEIIALFFAIDAMQYVGATPFSTSYNVILNKLFNMIPQETSDAIE
HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
NTRDKILMWQPNIKVDKRVLRNLYDASVEEKTVNILYETTEDEIYREIELMGLYVYNGYW
CCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHEEEEEECCEE
YCPAYCRMRRGIRLFRVDRIKKTIINSTSHSTNVHSNVKEWLYSECESNLIKLEVSLSKE
ECHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
GKRKAESISWLRDNMEYNSDGTAKITKNINPSEEWFYVELLWNIGQEAEIIEPDCIKNKL
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHH
IERAKSVITKYNDF
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]