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The map label for this gene is ylbH [H]

Identifier: 218232815

GI number: 218232815

Start: 3954591

End: 3955157

Strand: Reverse

Name: ylbH [H]

Synonym: BCB4264_A4031

Alternate gene names: 218232815

Gene position: 3955157-3954591 (Counterclockwise)

Preceding gene: 218234022

Following gene: 218231719

Centisome position: 72.99

GC content: 35.45

Gene sequence:

>567_bases
ATGAGAGTAGTTTCAGGAAAATGTAAAGGACACCCACTTAAAGCGGTTCCTGGTAATACAACACGTCCAACGACAGATAA
AGTAAAAGAATCTATTTTTAATATGATAGGTCCTTATTTTGATGGTGGTATCGCCCTTGATTTATTTGGCGGTAGTGGTG
GTCTTGGAATTGAGGCATTGAGCAGAGGGATTGATAAAGCAATTTTTGTTGATCGGGATAGTAAAGCGATAAAAGTAATT
CATCAAAATTTAGAAAGTTGTAGAGTACAGGAACAAGCTGAAGTATATCGAAATGATGCTGAACGTGCAGTAAAGGCGCT
AATAAAACGTGAAATGTCATTCGATCTTATATTGATAGATCCTCCATATAAAGAGCAAAAAATTGTATCTTTAATTAGTA
TAATGGATCAACATGGATTGCTACATAGTGATGGATTAATTATGGCAGAGCATGGTAATGATGTAGTTTTACCTAATTCA
ATAGGAAGGCTTGTAAAAGTACGAGCTGAGAATTATGGGATTACTGCAATATCGATTTATAAGTATGAAGGTGAGGGGAC
AGAATGA

Upstream 100 bases:

>100_bases
TTTTCCTATAGTTAGGTGAATGTGGTTTGTTAACGGTTACCGAAGTGGGAATGGCTTTCTATAATCGCTCGATAGATTGA
AATAAAGGTAGTGACAACAG

Downstream 100 bases:

>100_bases
CAAGTATAGCTATTTCTTCAGGAAGTTTTGATCCAATTACCCTTGGGCATCTGGATATTATTAAAAGGGGAGCAAAAGTA
TTTGATGAGGTGTACGTAGT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRVVSGKCKGHPLKAVPGNTTRPTTDKVKESIFNMIGPYFDGGIALDLFGGSGGLGIEALSRGIDKAIFVDRDSKAIKVI
HQNLESCRVQEQAEVYRNDAERAVKALIKREMSFDLILIDPPYKEQKIVSLISIMDQHGLLHSDGLIMAEHGNDVVLPNS
IGRLVKVRAENYGITAISIYKYEGEGTE

Sequences:

>Translated_188_residues
MRVVSGKCKGHPLKAVPGNTTRPTTDKVKESIFNMIGPYFDGGIALDLFGGSGGLGIEALSRGIDKAIFVDRDSKAIKVI
HQNLESCRVQEQAEVYRNDAERAVKALIKREMSFDLILIDPPYKEQKIVSLISIMDQHGLLHSDGLIMAEHGNDVVLPNS
IGRLVKVRAENYGITAISIYKYEGEGTE
>Mature_188_residues
MRVVSGKCKGHPLKAVPGNTTRPTTDKVKESIFNMIGPYFDGGIALDLFGGSGGLGIEALSRGIDKAIFVDRDSKAIKVI
HQNLESCRVQEQAEVYRNDAERAVKALIKREMSFDLILIDPPYKEQKIVSLISIMDQHGLLHSDGLIMAEHGNDVVLPNS
IGRLVKVRAENYGITAISIYKYEGEGTE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=186, Percent_Identity=27.9569892473118, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20640; Mature: 20640

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVSGKCKGHPLKAVPGNTTRPTTDKVKESIFNMIGPYFDGGIALDLFGGSGGLGIEAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH
SRGIDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAVKALIKREMSFDLILID
HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PPYKEQKIVSLISIMDQHGLLHSDGLIMAEHGNDVVLPNSIGRLVKVRAENYGITAISIY
CCCCHHHHHHHHHHHHHCCCEECCCEEEEECCCCEECCCCCCCEEEEECCCCCEEEEEEE
KYEGEGTE
EECCCCCC
>Mature Secondary Structure
MRVVSGKCKGHPLKAVPGNTTRPTTDKVKESIFNMIGPYFDGGIALDLFGGSGGLGIEAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH
SRGIDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAVKALIKREMSFDLILID
HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PPYKEQKIVSLISIMDQHGLLHSDGLIMAEHGNDVVLPNSIGRLVKVRAENYGITAISIY
CCCCHHHHHHHHHHHHHCCCEECCCEEEEECCCCEECCCCCCCEEEEECCCCCEEEEEEE
KYEGEGTE
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]