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The map label for this gene is fdhD2 [H]

Identifier: 218232440

GI number: 218232440

Start: 3590899

End: 3591696

Strand: Reverse

Name: fdhD2 [H]

Synonym: BCB4264_A3678

Alternate gene names: 218232440

Gene position: 3591696-3590899 (Counterclockwise)

Preceding gene: 218232758

Following gene: 218234531

Centisome position: 66.28

GC content: 34.84

Gene sequence:

>798_bases
GTGAAACCGATACAGGTAGAAAGAGAAATCTTTCGTTATGAACAAGGAGCATTTAAACATATAGAGGACAGCATTGTAAC
AGAGTTTCCTGTCACCATTAAAATGAACGGACAGGAGTTTGTTACAATGGTTAGTACTCCAGAATATATAGAAGATATGG
TAATAGGCTTCTTAGCGTCTGAAGGAATCATTCGGAAGTATGAAGACATTGATAGTGTATGGGTGCAGGAGAAAGAAGGA
TTTGTGCATGTAACAACGACAAAAGTAAATCCGTATTATGAACAAATGCAAAATAAACGCTATATTACGTCTTGTTGTGG
TATGAGTAGGCAAGGGTTTGTTTTTGCAAATGATGCACTAAGTGCAAAAAAAATGAAGGGTGTCCATGTACAGGTTGCTG
CCGATGATTGTTTTCGGTTAATGAAAGAAATGCAGCAATCTGCGGATACGTTTCATCGTACTGGTGGGGTTCATAATGCA
GCTTTATGTGATGTTAATGGTATTATTTTAAGCCGAATGGATATTGGTAGGCATAATGCACTAGACAAAATTTACGGTTA
TTGTTTAAGAAACGATATTTCTATAAAAGATAAAATCATTGTTTTTAGTGGTCGTATTTCTTCGGAAATATTATTGAAAG
TTGCAAAAATCGGTTGTGAAATTATACTATCAAAATCAGCTCCAACTGAGTTAGCTTTGCAACTAGCGGAAGATTTAGGT
ATTACGACAATAGGATTTATTCGTAATCACTCCTTAAATGTATATACCCATCCAGAACGTGTTTTAAATATAAAATAA

Upstream 100 bases:

>100_bases
AAATTAGTGAATTTGTTTTCCGATATGAAAGTAGAAGAAGATATTGCAGTTTCTGTATTTGTTTTTGATAAAAATATAAC
GTGAGAGAAGGATACTGATC

Downstream 100 bases:

>100_bases
AAGTGAGGCAATGAAGATGAAATCAGTTACATTAGACAAGTTGCAACGTCCGTTAAAGGATTTACGTATTTCAGTTACTG
ATCGCTGTAATTTTCGCTGC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDSVWVQEKEG
FVHVTTTKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMKGVHVQVAADDCFRLMKEMQQSADTFHRTGGVHNA
ALCDVNGIILSRMDIGRHNALDKIYGYCLRNDISIKDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAEDLG
ITTIGFIRNHSLNVYTHPERVLNIK

Sequences:

>Translated_265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDSVWVQEKEG
FVHVTTTKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMKGVHVQVAADDCFRLMKEMQQSADTFHRTGGVHNA
ALCDVNGIILSRMDIGRHNALDKIYGYCLRNDISIKDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAEDLG
ITTIGFIRNHSLNVYTHPERVLNIK
>Mature_265_residues
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLASEGIIRKYEDIDSVWVQEKEG
FVHVTTTKVNPYYEQMQNKRYITSCCGMSRQGFVFANDALSAKKMKGVHVQVAADDCFRLMKEMQQSADTFHRTGGVHNA
ALCDVNGIILSRMDIGRHNALDKIYGYCLRNDISIKDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAEDLG
ITTIGFIRNHSLNVYTHPERVLNIK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=272, Percent_Identity=28.6764705882353, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30022; Mature: 30022

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLAS
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCEEEEECCCEEEEEECCHHHHHHHHHHHHHC
EGIIRKYEDIDSVWVQEKEGFVHVTTTKVNPYYEQMQNKRYITSCCGMSRQGFVFANDAL
CCHHHHHHHHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCEEEECCCC
SAKKMKGVHVQVAADDCFRLMKEMQQSADTFHRTGGVHNAALCDVNGIILSRMDIGRHNA
CHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHH
LDKIYGYCLRNDISIKDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAEDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCC
ITTIGFIRNHSLNVYTHPERVLNIK
CEEEEEEECCCEEEEECCCEEEECC
>Mature Secondary Structure
MKPIQVEREIFRYEQGAFKHIEDSIVTEFPVTIKMNGQEFVTMVSTPEYIEDMVIGFLAS
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCEEEEECCCEEEEEECCHHHHHHHHHHHHHC
EGIIRKYEDIDSVWVQEKEGFVHVTTTKVNPYYEQMQNKRYITSCCGMSRQGFVFANDAL
CCHHHHHHHHHHHHEECCCCEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCEEEECCCC
SAKKMKGVHVQVAADDCFRLMKEMQQSADTFHRTGGVHNAALCDVNGIILSRMDIGRHNA
CHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHH
LDKIYGYCLRNDISIKDKIIVFSGRISSEILLKVAKIGCEIILSKSAPTELALQLAEDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCC
ITTIGFIRNHSLNVYTHPERVLNIK
CEEEEEEECCCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA