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The map label for this gene is tsr [C]

Identifier: 218232154

GI number: 218232154

Start: 592080

End: 594062

Strand: Direct

Name: tsr [C]

Synonym: BCB4264_A0613

Alternate gene names: 218232154

Gene position: 592080-594062 (Clockwise)

Preceding gene: 218233030

Following gene: 218232726

Centisome position: 10.93

GC content: 34.39

Gene sequence:

>1983_bases
ATGCAAAAAATATTTAACTGGGTTAAATGTATGAGTATCAATAAAAAATTAATCATTTCATTTTTTATTATTTTAACTAT
ACCAGGAATTATTATCGGTGGTGTTTCATATCAAACTGCCAAAACAAATTTTGAACATCAAATGACAGCTAAAGCAAAGG
AGAATATTTCGATTTTAAATACTGTTATTTCTCAAAATATAGAAGAGAAATTTGTTGATGCGACGTACTTTGCAGACATC
TTAACAGAGGATACATATCCAAACGGACAAGAAGAAATAGTAAGAACGAAGTTAGCGCAATATATAAAGCTTCATCCAGA
AGTAGAAGGTATTTATATTGGAACAGAGACGGGAAAGTTTATAAGAGAACCATTTATCCAGATGGCTGATGGGTATAATC
CAACAGATAGATCTTGGTATAAAGAAGCACATGAAAATAAAGGAAAAGTAATTGTTACTGCACCATATCAGTCAGCATCT
ACAAAAAATATGGTAGTGACAATTGCAAAAGAAGTAAAAGATGGTAAAGGTGTTATAGGAATTAATTTAAACTTAGATAA
CATCTTAAAAATTTCCAAAATGATTAACATTGGTGAAAAAGGTTATGCAGTTATTTTAGATCAAAATAAGCAAATTGTTA
GTCATCCATCTAGAAAACCAGGTGCAAAAGTTACTGATCCTTGGATTAAACCAATTTATGAAGATAAACAAGGAAATGTG
TCTTATACAGAACAAGATGATAAAAAGAATTTAATCTTTGCAACAAATGAGAAAACGGGCTGGAAAGTAGTTGGCGTTAT
GTTCGATGAAGAAATTACCCAAGCTGCCAGTCCAGTGTTTTATAAGACTTTGATTGTCATTGCTATCGCTATTGCATTTG
GTAGTATATTAATTTATTTCATTACAAAGTCTATTACAAGGCCATTACGAAAAATAGCTGAATCGGCATATAAAATTAGT
AAGGGAGATTTAACAGAGAAAATTACAATCCATTCCAAGGATGACATAGGGAAATTAGGGAATTCATTTAATGAAATGTC
TACGTCTTTACAAGATGTTATTACCCAAATTAGCTTTTCAGCAGAACATGTTGCAGCATCGGCAGAAGAGTTAACAGCGA
GCGTACAGCAAGCAAATGATGCGACAGATCAAATTACAATTGCAATGGAACAAGTATCAGGTGGGGCTGAATCACAAAGT
CAAGGTGTTGAAGAAGGTGCGGCTACATTGCAACAAGTAAATACAGCAATTCAAGATGTAACTGGAAGCGCAGAGTCAAT
TTCTATTTCCTCATTACATGCGCGAGAAAGAGCTGAAGAGGGAGAAGATTTAGTTGAACAAACTGCAAAACAAATGCAGT
CTATTTCTAGGTCGGTATCCGAGTCAGATGCTATTATTAAACTGCTTGATGAGAAATCAAAGCAAGTAGGAGCTATTTCT
GAAGCAATTCAAAACATCGCAACTCAAACAAACTTATTAGCTTTAAATGCGGCTATTGAAGCAGCAAGAGCAGGTGAACA
GGGACGAGGATTTGCTATTGTAGCAGATGAGGTTAGAAAATTAGCAGAGCAATCAGGAGAGTCATCTGGAGAGATTGCAA
ATTTAATTGCAGAAATTAAGGCGGATATTGAACATACTGTTAAGGCGATGGATAATGTGAATGGAGAAGTTCAACAGGGC
CTTGATGTTGTAACAAAAACGAAAGTAAGTTTTACGGAAATTTTAAGTTCTACTACACATATTGTTTCTCAAGTTAATCA
AATGGTAGAAACAACGAAGAGAATTGCTGGAGATGCAAATGAAGTGACAAATGCTATTGATGAAATTGCAGCTGCTGCAG
AAGAAAATACAGCTAGTATGCAAAGTGTTGCAGCTTCAACAGAAGAACAGGTTAATTCCATGGAGGAAATTAGTTCAGCT
TCGCAAAACTTAGCTGAGATGGCAGAAGAACTACAAGCGATGACTAGTAAATTTAAAGTATAA

Upstream 100 bases:

>100_bases
TAATTGACGAAAAAATTACATGTTATCATTATATATTGTTTTATATATGTTAATTGTATAAAATGACACAAGTATCCACA
TTACATAAAGGAGGCTTATT

Downstream 100 bases:

>100_bases
TAACAGCAGATAAGTAAGGTGAAAATAATATCACCTTACTTATTTTTCTATTCAGCAATTAGGGGAGTCATTAACGGGAT
GAAAAAAAGAAGAAGACTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MQKIFNWVKCMSINKKLIISFFIILTIPGIIIGGVSYQTAKTNFEHQMTAKAKENISILNTVISQNIEEKFVDATYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTETGKFIREPFIQMADGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAASPVFYKTLIVIAIAIAFGSILIYFITKSITRPLRKIAESAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSTSLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVTGSAESISISSLHARERAEEGEDLVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Sequences:

>Translated_660_residues
MQKIFNWVKCMSINKKLIISFFIILTIPGIIIGGVSYQTAKTNFEHQMTAKAKENISILNTVISQNIEEKFVDATYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTETGKFIREPFIQMADGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAASPVFYKTLIVIAIAIAFGSILIYFITKSITRPLRKIAESAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSTSLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVTGSAESISISSLHARERAEEGEDLVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV
>Mature_660_residues
MQKIFNWVKCMSINKKLIISFFIILTIPGIIIGGVSYQTAKTNFEHQMTAKAKENISILNTVISQNIEEKFVDATYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTETGKFIREPFIQMADGYNPTDRSWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAASPVFYKTLIVIAIAIAFGSILIYFITKSITRPLRKIAESAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSTSLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVTGSAESISISSLHARERAEEGEDLVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=381, Percent_Identity=28.8713910761155, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1787690, Length=379, Percent_Identity=29.5514511873351, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=30.9148264984227, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI1788194, Length=366, Percent_Identity=26.5027322404372, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1789453, Length=360, Percent_Identity=26.1111111111111, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71985; Mature: 71985

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIFNWVKCMSINKKLIISFFIILTIPGIIIGGVSYQTAKTNFEHQMTAKAKENISILN
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
TVISQNIEEKFVDATYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTETGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMADGYNPTDRSWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAASPVFYKTLIVIAIAIAFGSILIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIAESAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSTSLQDVITQISFS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNTAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHH
TGSAESISISSLHARERAEEGEDLVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKIFNWVKCMSINKKLIISFFIILTIPGIIIGGVSYQTAKTNFEHQMTAKAKENISILN
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
TVISQNIEEKFVDATYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTETGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMADGYNPTDRSWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC
SYTEQDDKKNLIFATNEKTGWKVVGVMFDEEITQAASPVFYKTLIVIAIAIAFGSILIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIAESAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSTSLQDVITQISFS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNTAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHH
TGSAESISISSLHARERAEEGEDLVEQTAKQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNQMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA