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The map label for this gene is ydiB [H]

Identifier: 218231888

GI number: 218231888

Start: 249892

End: 250365

Strand: Direct

Name: ydiB [H]

Synonym: BCB4264_A0289

Alternate gene names: 218231888

Gene position: 249892-250365 (Clockwise)

Preceding gene: 218235774

Following gene: 218231156

Centisome position: 4.61

GC content: 35.65

Gene sequence:

>474_bases
GTGAGTAAATATGAAGTAACAACAAAATCTTCTGAGGAAACACAAAGGTTATCAGAAAAACTAGGTGAGCTCGTAGAGGC
ACAAGACGTAATTATTTTAGAAGGAGATCTTGGAGCTGGTAAGACGACTTTTACAAAGGGACTAGCAAAAGGTCTTGGAG
TGAAAAGAGTTGTAAATAGTCCTACCTTTAATATCATCAAAGAATATAAAGGAAGATTACCGCTATATCATATGGACGTG
TATCGCTTAGCAGAAAGTGAAGAGGACTTAGGCTTTGATGAATATTTCTACGGTGAAGGAATTACGGTAGTAGAATGGGC
TCATTTAATAGAAGCATATTTACCGAATGAAAAGTTACAAATTAGTTTATTCCATGCTGGAGATGACACAAGAAAAATTA
TACTCGAGCCAATTGGAGATCGCTATATTAGATTATGTGAGGAGCTATTACAAGATGAAAGTACTAGCAATTGA

Upstream 100 bases:

>100_bases
AGTCAAACTATCCTTAGGACAACTCCTAAGGACTTTTTTATATATTCAAAACCTGTATAATAAAGAGTAGAGAACATTGT
GAGTAAAGTAGGTGAAGTCT

Downstream 100 bases:

>100_bases
TACTTCAAATTACGTAATGGGTGTATCCCTTATTGAGGAAGAAAACGTAATTGGGGAAATCATTACAAATTTAACAAAAA
ACCATTCTGTACGTCTTATG

Product: conserved hypothetical protein TIGR00150

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSKYEVTTKSSEETQRLSEKLGELVEAQDVIILEGDLGAGKTTFTKGLAKGLGVKRVVNSPTFNIIKEYKGRLPLYHMDV
YRLAESEEDLGFDEYFYGEGITVVEWAHLIEAYLPNEKLQISLFHAGDDTRKIILEPIGDRYIRLCEELLQDESTSN

Sequences:

>Translated_157_residues
MSKYEVTTKSSEETQRLSEKLGELVEAQDVIILEGDLGAGKTTFTKGLAKGLGVKRVVNSPTFNIIKEYKGRLPLYHMDV
YRLAESEEDLGFDEYFYGEGITVVEWAHLIEAYLPNEKLQISLFHAGDDTRKIILEPIGDRYIRLCEELLQDESTSN
>Mature_156_residues
SKYEVTTKSSEETQRLSEKLGELVEAQDVIILEGDLGAGKTTFTKGLAKGLGVKRVVNSPTFNIIKEYKGRLPLYHMDVY
RLAESEEDLGFDEYFYGEGITVVEWAHLIEAYLPNEKLQISLFHAGDDTRKIILEPIGDRYIRLCEELLQDESTSN

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=126, Percent_Identity=35.7142857142857, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17822; Mature: 17691

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYEVTTKSSEETQRLSEKLGELVEAQDVIILEGDLGAGKTTFTKGLAKGLGVKRVVNS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCC
PTFNIIKEYKGRLPLYHMDVYRLAESEEDLGFDEYFYGEGITVVEWAHLIEAYLPNEKLQ
CHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEE
ISLFHAGDDTRKIILEPIGDRYIRLCEELLQDESTSN
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKYEVTTKSSEETQRLSEKLGELVEAQDVIILEGDLGAGKTTFTKGLAKGLGVKRVVNS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCC
PTFNIIKEYKGRLPLYHMDVYRLAESEEDLGFDEYFYGEGITVVEWAHLIEAYLPNEKLQ
CHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEE
ISLFHAGDDTRKIILEPIGDRYIRLCEELLQDESTSN
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]