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The map label for this gene is ydiC [H]

Identifier: 218231156

GI number: 218231156

Start: 250346

End: 251038

Strand: Direct

Name: ydiC [H]

Synonym: BCB4264_A0290

Alternate gene names: 218231156

Gene position: 250346-251038 (Clockwise)

Preceding gene: 218231888

Following gene: 218233469

Centisome position: 4.62

GC content: 36.22

Gene sequence:

>693_bases
ATGAAAGTACTAGCAATTGATACTTCAAATTACGTAATGGGTGTATCCCTTATTGAGGAAGAAAACGTAATTGGGGAAAT
CATTACAAATTTAACAAAAAACCATTCTGTACGTCTTATGCCAGCTGTAGAGAAACTGTTAAAAGAGTGTGGCGTAAAAC
CGAAGGAATTAACTAAAATCGTTGTAGCTGCTGGACCTGGATCCTATACAGGTGTTCGTATAGGCGTGACAGCGGCGAAA
ACATTAGCTTGGTCACTTCAAATACCAATTGTAGGTGTATCAAGTTTAGAGGTAGTAGCTGCAAACGGTGCTAACTTTAA
CGGGTTAATTTGTCCTTTATTTGATGGAAGACGTGGGCAAATTTATACTGGGTTATATACATATGAAGGAGAGCAGTTAA
CTTCAATAGAAGAAGACCGAATTATTCTTATTGTAGACTGGTTGCAAATGTTAAAAGATAAAGGACAGCCTGTTTTATTT
ATCGGTAACGATGTTAAATTGCATAAAGAAACAATTATAGAACATTTAGGTGATCAAGCTGTATTCGCTCCATTTACTAA
AAATAACCCAAGACCAAGTGAGCTAGCATTCTTAGGATTACAAAAAGAAGAACAAGATGTGCATACGTTTGTTCCAAGCT
ATCTTCGTTTAGCTGAAGCTGAAACAAAGTGGTTAGAAAGTCAAAACAAGTAG

Upstream 100 bases:

>100_bases
TTACAAATTAGTTTATTCCATGCTGGAGATGACACAAGAAAAATTATACTCGAGCCAATTGGAGATCGCTATATTAGATT
ATGTGAGGAGCTATTACAAG

Downstream 100 bases:

>100_bases
GAGCTTGCAGAAGATGGATATGATATTTAGAAGGATGGAGCTTGATGATATTGCTCAAATTGTAGCTATTGAAGAAGCGT
CTTTTTCAACTCCTTGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKVLAIDTSNYVMGVSLIEEENVIGEIITNLTKNHSVRLMPAVEKLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAK
TLAWSLQIPIVGVSSLEVVAANGANFNGLICPLFDGRRGQIYTGLYTYEGEQLTSIEEDRIILIVDWLQMLKDKGQPVLF
IGNDVKLHKETIIEHLGDQAVFAPFTKNNPRPSELAFLGLQKEEQDVHTFVPSYLRLAEAETKWLESQNK

Sequences:

>Translated_230_residues
MKVLAIDTSNYVMGVSLIEEENVIGEIITNLTKNHSVRLMPAVEKLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAK
TLAWSLQIPIVGVSSLEVVAANGANFNGLICPLFDGRRGQIYTGLYTYEGEQLTSIEEDRIILIVDWLQMLKDKGQPVLF
IGNDVKLHKETIIEHLGDQAVFAPFTKNNPRPSELAFLGLQKEEQDVHTFVPSYLRLAEAETKWLESQNK
>Mature_230_residues
MKVLAIDTSNYVMGVSLIEEENVIGEIITNLTKNHSVRLMPAVEKLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAK
TLAWSLQIPIVGVSSLEVVAANGANFNGLICPLFDGRRGQIYTGLYTYEGEQLTSIEEDRIILIVDWLQMLKDKGQPVLF
IGNDVKLHKETIIEHLGDQAVFAPFTKNNPRPSELAFLGLQKEEQDVHTFVPSYLRLAEAETKWLESQNK

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=145, Percent_Identity=30.3448275862069, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25420; Mature: 25420

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLAIDTSNYVMGVSLIEEENVIGEIITNLTKNHSVRLMPAVEKLLKECGVKPKELTKI
CEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHEEEE
VVAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSLEVVAANGANFNGLICPLFDGRRGQ
EEEECCCCCCEEEEEEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCE
IYTGLYTYEGEQLTSIEEDRIILIVDWLQMLKDKGQPVLFIGNDVKLHKETIIEHLGDQA
EEEEEEEECCCEECCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHCCCCE
VFAPFTKNNPRPSELAFLGLQKEEQDVHTFVPSYLRLAEAETKWLESQNK
EEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVLAIDTSNYVMGVSLIEEENVIGEIITNLTKNHSVRLMPAVEKLLKECGVKPKELTKI
CEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHEEEE
VVAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSLEVVAANGANFNGLICPLFDGRRGQ
EEEECCCCCCEEEEEEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCE
IYTGLYTYEGEQLTSIEEDRIILIVDWLQMLKDKGQPVLFIGNDVKLHKETIIEHLGDQA
EEEEEEEECCCEECCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHCCCCE
VFAPFTKNNPRPSELAFLGLQKEEQDVHTFVPSYLRLAEAETKWLESQNK
EEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]