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The map label for this gene is ybfH [H]

Identifier: 218231683

GI number: 218231683

Start: 301303

End: 302223

Strand: Direct

Name: ybfH [H]

Synonym: BCB4264_A0328

Alternate gene names: 218231683

Gene position: 301303-302223 (Clockwise)

Preceding gene: 218234305

Following gene: 218235413

Centisome position: 5.56

GC content: 32.25

Gene sequence:

>921_bases
ATGAAAGAAATATGCATGTTATTAGTGGCTGTTATATTATGGGGCACAGCCATTGCGCCAACAAAATGGGCGTTAGAATC
TATTCAGCCGTTTACTTTGTTATTTATTCGTCTTTTCTTTGCAGGTGGAATTTGTATGCTATTCTCATTTAAGGAATTAC
AAAAATCAGTTGTACATAAAAAAGTTCCATGGAAAAGAATGAGTTTGTTAGCTTTTACCGGTGTAGCTGGTTATTTTATG
TTTACATCCTACGGCATTTCTTTAACAAGTGGATTACATGTGAGTATTATAGATGCTGCATTACCATTAGTTACAATTCT
TTTTTCAGCACTCTTTTTGAAAGAGAAAATTCGATTGAATTATTGGATAGGAATTATATTGGGTGCTATAGGAGTACTCT
TTATTACGATTCCATCTAAAAGTGCTAATCAAGAAGTGTCCTTAATAGGAGATATACTAATATTATTAAGTACTTTTCTA
TTTGCTTTCTACACAGTTTTGCTAAAACGACCAAAACAAGAACAGTATTTATCAAACGAGGTTTTTACAACATTAACTTT
AATTATTGGAGCTGTTATTCTCTTACCGTTTGCACTGATAGAAATTTTTTATTACGGTCTTCCAAAGGTTGAAACTTGGA
AAACGGGACTTAGTGTAATATACCTTGTTATTGGAGCAACAATTTTAGCATATTGGTTTTGGAATAAAGCGCTAGAGAGA
GTTTCAGCATCAGTAAGCGGATTATATTTAAATGCATTACCATTAATAAGTATTATTACTTCAATTATTCTATTAAATGA
ATCTCTGACATGGAGAGTAATAATGGGAGCGAGTTTAGTCTTAATTGGAGTAGGATGGGCGGATAAGCAAAAGTTATGTA
ATCTATTAAAAGGTAACAAGGTGGAGAATAGAGACTGTTAA

Upstream 100 bases:

>100_bases
TGTGATCTTACATAACCTTTTGTGCTTTTAAAGGATTTTACATTAGAAAAAATCTATAATTAAGGTAGTTAACATATATT
TTTGATGGGTGTGGGGAATT

Downstream 100 bases:

>100_bases
ACAGTATGATTTATATAATTGAAATGTTAAAAAGATACCTTATATATGAGGTATCTTTTTTATTTAGCAAAGATAATAGA
CTAAAGTTAGTATGGATATT

Product: transporter, Drug/Metabolite Exporter family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHKKVPWKRMSLLAFTGVAGYFM
FTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLNYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFL
FAFYTVLLKRPKQEQYLSNEVFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALER
VSASVSGLYLNALPLISIITSIILLNESLTWRVIMGASLVLIGVGWADKQKLCNLLKGNKVENRDC

Sequences:

>Translated_306_residues
MKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHKKVPWKRMSLLAFTGVAGYFM
FTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLNYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFL
FAFYTVLLKRPKQEQYLSNEVFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALER
VSASVSGLYLNALPLISIITSIILLNESLTWRVIMGASLVLIGVGWADKQKLCNLLKGNKVENRDC
>Mature_306_residues
MKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHKKVPWKRMSLLAFTGVAGYFM
FTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLNYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFL
FAFYTVLLKRPKQEQYLSNEVFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALER
VSASVSGLYLNALPLISIITSIILLNESLTWRVIMGASLVLIGVGWADKQKLCNLLKGNKVENRDC

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34158; Mature: 34158

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHK
CHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSNE
HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSASVSGLYLNALPLISIITSIILLNESLTWRVIMGASLVLIGVGWADKQKLCNLLKGNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCCCHHHHHHHHCCCC
VENRDC
CCCCCC
>Mature Secondary Structure
MKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHK
CHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLN
CCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSNE
HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSASVSGLYLNALPLISIITSIILLNESLTWRVIMGASLVLIGVGWADKQKLCNLLKGNK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCCCHHHHHHHHCCCC
VENRDC
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]