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The map label for this gene is 218231643

Identifier: 218231643

GI number: 218231643

Start: 3862731

End: 3862958

Strand: Reverse

Name: 218231643

Synonym: BCB4264_A3942

Alternate gene names: NA

Gene position: 3862958-3862731 (Counterclockwise)

Preceding gene: 218235927

Following gene: 218235147

Centisome position: 71.28

GC content: 38.6

Gene sequence:

>228_bases
ATGAAGAAGTTAGTCGAGACGATTGTCAAGCCTCTTGTCGATTATCCTGAAGATGTAAAAGTTACACAGGAACTTTGCAA
CGGAGAGATAAAGTATCGATTAACTGTACATCCTGAGGATGTTGGAAAAGTCATTGGAAAGCAAGGGAGAGTTGCGAAAG
CGATTCGAATGCTCTTGTATTCAGTGGGACATCATAATGATGAAAAAGTAACACTGGAAATTCAATAA

Upstream 100 bases:

>100_bases
GTGCTAAACCATCTGATACAGTTCGTAACTTATTCTCTAACCAAGGTATCATGGAGAAATTCCACTTATCTAAACAAGGT
AAGTAATTGAGGCAATGACT

Downstream 100 bases:

>100_bases
ACGTAAAAAAGGGCGAGGAGTTATTCCTCTCCCTTTTTTAACATTTAAATAGAGAGTGCATGTTCCATCTGTGAAATGGA
GATGCTTAATTTATATAGAA

Product: KH domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKKLVETIVKPLVDYPEDVKVTQELCNGEIKYRLTVHPEDVGKVIGKQGRVAKAIRMLLYSVGHHNDEKVTLEIQ

Sequences:

>Translated_75_residues
MKKLVETIVKPLVDYPEDVKVTQELCNGEIKYRLTVHPEDVGKVIGKQGRVAKAIRMLLYSVGHHNDEKVTLEIQ
>Mature_75_residues
MKKLVETIVKPLVDYPEDVKVTQELCNGEIKYRLTVHPEDVGKVIGKQGRVAKAIRMLLYSVGHHNDEKVTLEIQ

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004088
- InterPro:   IPR020627 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8542; Mature: 8542

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVETIVKPLVDYPEDVKVTQELCNGEIKYRLTVHPEDVGKVIGKQGRVAKAIRMLLY
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
SVGHHNDEKVTLEIQ
HHCCCCCCEEEEEEC
>Mature Secondary Structure
MKKLVETIVKPLVDYPEDVKVTQELCNGEIKYRLTVHPEDVGKVIGKQGRVAKAIRMLLY
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
SVGHHNDEKVTLEIQ
HHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]