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The map label for this gene is ssb2 [H]

Identifier: 218231056

GI number: 218231056

Start: 3520677

End: 3521048

Strand: Reverse

Name: ssb2 [H]

Synonym: BCB4264_A3616

Alternate gene names: 218231056

Gene position: 3521048-3520677 (Counterclockwise)

Preceding gene: 218231528

Following gene: 218232956

Centisome position: 64.98

GC content: 32.53

Gene sequence:

>372_bases
ATGCATCAAATTATTACAATTACAGGTCGCTTAACTCGTGATCCTGAGAGTAATACGTATGGTGAAAAGACAGTTTGTCG
TTTTGCTGTAGCAGTAGATGATGGGTATGGAGATAAAAAAACTACTGATTTCTTTAATGTATCTGTTTGGGGGAAAATGG
GTGAAAAGGTACAAAGATACCAAAAGAAAGGTTCTGTTGTGCAAGTAATCGGTAAAATGAAATCTTCTAAGAAGGATAAA
ACTACGTACTGGGAATTACGCGCAAATAACATTGTATTTTTTACCTTTGATAATAATAGTAATCAACAACAAAATAACTT
TGAAATGTTCACTGGTGACATAAATATCAGTGATGATGATTTACCATTTTAA

Upstream 100 bases:

>100_bases
TAAATTGGCTGTATTTCTGTTGTTAAAACAGCTTCATGACTAGGTGGCAAATGAAACATTTTTACCAAATTAATTAAACA
TTAGTTGGAGGTAATTTATT

Downstream 100 bases:

>100_bases
AGTAGGTTATTTATTGGTGGAGGTGATTATATGAGTGATCAGAGAAGGTTACGGTCGGAGTTAAAACAAGGGCTCCATCA
ATTTACGATGACCCTTTATA

Product: single-strand binding protein family

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2 [H]

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MHQIITITGRLTRDPESNTYGEKTVCRFAVAVDDGYGDKKTTDFFNVSVWGKMGEKVQRYQKKGSVVQVIGKMKSSKKDK
TTYWELRANNIVFFTFDNNSNQQQNNFEMFTGDINISDDDLPF

Sequences:

>Translated_123_residues
MHQIITITGRLTRDPESNTYGEKTVCRFAVAVDDGYGDKKTTDFFNVSVWGKMGEKVQRYQKKGSVVQVIGKMKSSKKDK
TTYWELRANNIVFFTFDNNSNQQQNNFEMFTGDINISDDDLPF
>Mature_123_residues
MHQIITITGRLTRDPESNTYGEKTVCRFAVAVDDGYGDKKTTDFFNVSVWGKMGEKVQRYQKKGSVVQVIGKMKSSKKDK
TTYWELRANNIVFFTFDNNSNQQQNNFEMFTGDINISDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14167; Mature: 14167

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQIITITGRLTRDPESNTYGEKTVCRFAVAVDDGYGDKKTTDFFNVSVWGKMGEKVQRY
CCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHH
QKKGSVVQVIGKMKSSKKDKTTYWELRANNIVFFTFDNNSNQQQNNFEMFTGDINISDDD
HHCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCC
LPF
CCC
>Mature Secondary Structure
MHQIITITGRLTRDPESNTYGEKTVCRFAVAVDDGYGDKKTTDFFNVSVWGKMGEKVQRY
CCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHH
QKKGSVVQVIGKMKSSKKDKTTYWELRANNIVFFTFDNNSNQQQNNFEMFTGDINISDDD
HHCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCC
LPF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12354221 [H]