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The map label for this gene is ypeB [H]

Identifier: 218230925

GI number: 218230925

Start: 2663742

End: 2665082

Strand: Reverse

Name: ypeB [H]

Synonym: BCB4264_A2759

Alternate gene names: 218230925

Gene position: 2665082-2663742 (Counterclockwise)

Preceding gene: 218234005

Following gene: 218232907

Centisome position: 49.18

GC content: 34.97

Gene sequence:

>1341_bases
ATGTTACGAGGTATTATCATTGTATTATTAACAGTCGGTGTAGTAGGAACAGGCTATTGGGGCTATAAAGAGCACCAAGA
GAAAAATGCAGTTTTAATTCGAGCGGAAAATAGCTATCAACGTGCATTCCATGATTTAGCATACGAAGTCGATTTATTAC
ACGATAAAATTGGCACAACACTTGCGATGAATTCACGATCATCTTTATCACCTGCATTAGCGGATGTATGGCGTTTAACA
TCTGAAGCTCGCTCGGATGTAGGGCAACTTCCTTTAACATTAATGCCATTTAATAAAACGGAAGAATTTTTAGCGAATAT
CGGTGATTTTAGTTACCGTGCAGCCATTCGTGATTTAGAAAAAGAACCGTTAAATGAGCAAGAATATAAAACGTTGCAAA
CTTTATATTCAAATGCAGGAAATATACAAGATGAACTAAGAAAAGTACAACATCTTGTTTTGAAAAATAATTTACGCTGG
ATGGATGTAGAAATGGCACTTGCATCAAATCGCGATCCAGCAGATAACACAATTATTGATGGATTGAAAACTGTAGAGAA
AAACGTAACATCATATTCTTCTACAAACTTCGGACCGACCTTTACAAGTGCGCAAAAAAATAAAAAAGGTGGATTTGAAG
CGGAAGGAAAGGCAATTTCTAAAGATGAAGCGGCGAAAATTGCCAAATCGTTTTTGAATTTAAAAGGAAATGAAAAAGTA
GATGTTGAGAAAAGCGGAAAAGGTGCGAAAGAATCCTTCTATAGTGTGAAAATTAAAGATGAAGCAACGAACAATGAGTT
CTATATGGATATTACCGGAAAAGGCGGATATCCAATTTGGGTTATGAATAACCGCGAAATTAAAGAACAGAAAGTTAGTT
TAAACGATGCAGGTAGTAAAGGTTTGAAATTTTTAAAGGACCATAAGTTTAATAATATGGAGCTTTATGATAGCTCTCAA
TATGATAATGTTGGTGTATTTACGTATGTAGTAAATGAAAATGGAGTACGAATTTATCCAGAAGCAATCCAAATGAAAAT
TGCTTTAGATGATGGTTCTATCGTTGGGTTCTCCGCAAAAGAATACTTAGCGTCACATCAAAAGCGAACAGTTCCATCGG
CAAAGCTAACTGCAGCAGAAGCAAGAAAGAAAATCAATCCGGATGTAAAAGTTATGGAAGAACGTAAAGCTTTAGTAGTC
AATGATTTGCATAATGAAGTACTTTGCTATGAATTTGTAGGTACTTTAGGAAAAGATACGTACCAAATATTCATTAATGC
TAATAGCGGGGCCGAGGAAAAGGTAAAGAAAATGCAAGCTGTTGAAAAAATTTATGATTAA

Upstream 100 bases:

>100_bases
TTTCAATCCAGATACTGCGACTAGTAAATGGATTTGGACTCGTCCACAAATTAAAAAAATCGGTAAACATATTTTCTGTA
AATAGAGCGGAGGTGGGACA

Downstream 100 bases:

>100_bases
ACCTTAAAAGTGAAGTGGTGAAAATAATGAAAACTCTAATATATATATTAATGCTTTGCTTCGTTATAACTGGATGCAGT
ATTGGAACAAAAGAAAACCC

Product: germination protein YpeB

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLRGIIIVLLTVGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRSSLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNEQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
DVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKVSLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKALVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Sequences:

>Translated_446_residues
MLRGIIIVLLTVGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRSSLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNEQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
DVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKVSLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKALVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD
>Mature_446_residues
MLRGIIIVLLTVGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRSSLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNEQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
DVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKVSLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKALVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50083; Mature: 50083

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIIIVLLTVGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRSSLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNEQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
DVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKVSLNDAGSK
ECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKALVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRGIIIVLLTVGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRSSLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNEQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
DVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKVSLNDAGSK
ECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKALVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]