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The map label for this gene is ybxG [H]

Identifier: 218230873

GI number: 218230873

Start: 3340888

End: 3342279

Strand: Reverse

Name: ybxG [H]

Synonym: BCB4264_A3459

Alternate gene names: 218230873

Gene position: 3342279-3340888 (Counterclockwise)

Preceding gene: 218235325

Following gene: 218232849

Centisome position: 61.68

GC content: 37.64

Gene sequence:

>1392_bases
GTGGCAAACAAAGAATTGAAAAGAGGTTTAGAAGCACGTCATATTCAAATGATTGCTTTAGGCGGAACGATTGGTGTTGG
TTTGTTTATGGGGTCAGCCAGCACAATTAAATGGACAGGTCCGTCAGTAATGCTTGCTTATGCAATTGCAGGTATTTTCA
TCTTCTTCATCATGCGTGCCATGGGAGAAATGTTGTATATGGAGCCAAGTACAGGCTCATTTGCGACATTCGGTCATAAG
TATATTCATCCACTAGCTGGTTATATGACAGCGTGGAGTAACTGGTTCCAGTGGGTTATCGTTGGGATGTCAGAAATTAT
CGCGGTTGGAGCGTATATGCAATATTGGTTCCCAGATTTACCAGCTTGGATACCAGGTATAATTGCAATGGTTATTCTTG
GTGCAGCTAATTTAATTTCTGTTAAGTCATTTGGTGAATTTGAATTTTGGTTTGCGATGATTAAAATCGTTACGATTCTA
TTAATGATTATTGCAGGATTTGGCCTTATTTTCTTTGGAATTGGTAACGGCGGAGAAGCGGTTGGCATATCTAATCTTTG
GTCAAATGGCGGTTTCTTTACAGGTGGTTTCTCAGGATTCTTCTTTGCTTTATCACTTGTAGTTGGTGCATACCAAGGTG
TGGAATTAATCGGTATTACTGCTGGTGAAGCGAAGAATCCAAAGAAGACACTTACAAGAGCGATTCAAAGTACAATTTGG
CGTATCTTAATTTTCTATATTGGTGCTATTTTCGTTATTGTAACTGTGTATCCGTGGGATCAATTAAGTACAATTGGTAG
TCCGTTCGTAGCAACTTTTGCGAAAGTTGGTATTACGGCAGCTGCTGGACTTATTAACTTCGTTGTAATTACAGCAGCAA
TGTCTGGTTGTAATAGTGGTATTTATAGTGCTGGTCGTATGCTTTATACGTTAGGTGTAAATGGACAAGCACCGAAATAT
TTCACGAAACTTTCTGGAAATGGTGTACCTTTATTTGGTACAGTTGGCGTAATTATCGGTCTGGCGGTTGGTGTTGTTTT
AAGTTACATCGCACCGAAAAACTTATTCGTATATGTATATAGTGCGAGTGTACTTCCTGGAATGGTACCATGGTTTGTCA
TTTTAATTAGTCAAATTAATTTTAGAAAAGAAAAGGGAGCAGAGATGAAAGATCATCCGTTCAAAATGCCATTTGCTCCT
GTTACAAACTATTTAACAATTGCCTTTTTAATTATGGTATTAATCGGAATGTGGTTTAACGATGATACTCGTATTTCATT
AGTTGTAGGTATTATTTTCTTAGCTATCGTTACAATTAGTTTCTATGCTTTCGGAATAGGAAAGCGAGCTCCGTTAGACG
TTCAAAATAATAAAGAGATTTCAAGTAAATAA

Upstream 100 bases:

>100_bases
AAAATGACGTTTGCTTCATCATTTTCAGGGCCGAAAGGAATTAGGGGAAAGTATCTTGTGTTAAAATGCGGCTATGAATC
ATCTAAGAGGGGGAAGTGAA

Downstream 100 bases:

>100_bases
AGAAAAGGCTGTTCATCTGGAACAGCCTTTTCTTATTGTTGTTATTTGTCGATAAATCGATATAATTTGATTTATGATAG
ATATATTTGAAAAATCGTTG

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHK
YIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGIIAMVILGAANLISVKSFGEFEFWFAMIKIVTIL
LMIIAGFGLIFFGIGNGGEAVGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKNPKKTLTRAIQSTIW
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKY
FTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAP
VTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRAPLDVQNNKEISSK

Sequences:

>Translated_463_residues
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHK
YIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGIIAMVILGAANLISVKSFGEFEFWFAMIKIVTIL
LMIIAGFGLIFFGIGNGGEAVGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKNPKKTLTRAIQSTIW
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKY
FTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAP
VTNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRAPLDVQNNKEISSK
>Mature_462_residues
ANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPSTGSFATFGHKY
IHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGIIAMVILGAANLISVKSFGEFEFWFAMIKIVTILL
MIIAGFGLIFFGIGNGGEAVGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKNPKKTLTRAIQSTIWR
ILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTLGVNGQAPKYF
TKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPV
TNYLTIAFLIMVLIGMWFNDDTRISLVVGIIFLAIVTISFYAFGIGKRAPLDVQNNKEISSK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=450, Percent_Identity=62.4444444444444, Blast_Score=565, Evalue=1e-162,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=43.2967032967033, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1786602, Length=439, Percent_Identity=47.1526195899772, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI1790653, Length=432, Percent_Identity=43.9814814814815, Blast_Score=360, Evalue=1e-101,
Organism=Escherichia coli, GI1786302, Length=438, Percent_Identity=40.1826484018265, Blast_Score=342, Evalue=4e-95,
Organism=Escherichia coli, GI87081915, Length=471, Percent_Identity=35.8811040339703, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI87081708, Length=441, Percent_Identity=36.281179138322, Blast_Score=290, Evalue=2e-79,
Organism=Escherichia coli, GI1788480, Length=427, Percent_Identity=36.5339578454333, Blast_Score=279, Evalue=2e-76,
Organism=Escherichia coli, GI1789017, Length=463, Percent_Identity=33.4773218142549, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI87082023, Length=456, Percent_Identity=24.780701754386, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081869, Length=401, Percent_Identity=23.1920199501247, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324061, Length=439, Percent_Identity=34.3963553530752, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6320772, Length=444, Percent_Identity=34.009009009009, Blast_Score=212, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6324990, Length=504, Percent_Identity=30.952380952381, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6324059, Length=438, Percent_Identity=31.5068493150685, Blast_Score=189, Evalue=8e-49,
Organism=Saccharomyces cerevisiae, GI6324924, Length=413, Percent_Identity=30.9927360774818, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6322892, Length=440, Percent_Identity=30.2272727272727, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322967, Length=413, Percent_Identity=28.3292978208232, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6321053, Length=431, Percent_Identity=29.0023201856148, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321629, Length=416, Percent_Identity=27.1634615384615, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6324553, Length=403, Percent_Identity=31.0173697270471, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6319824, Length=398, Percent_Identity=30.1507537688442, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6319608, Length=421, Percent_Identity=28.2660332541568, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=400, Percent_Identity=28.75, Blast_Score=150, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=410, Percent_Identity=26.5853658536585, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320717, Length=398, Percent_Identity=26.3819095477387, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6319542, Length=397, Percent_Identity=26.9521410579345, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6324981, Length=415, Percent_Identity=29.6385542168675, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320364, Length=499, Percent_Identity=23.4468937875752, Blast_Score=90, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50244; Mature: 50113

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRA
CCCHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDL
HHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAWIPGIIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIFFGIGNGGEA
CHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKNPKKTLTRAIQSTIW
EEHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSG
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVY
HHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLIMVLIGMWFN
ECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDTRISLVVGIIFLAIVTISFYAFGIGKRAPLDVQNNKEISSK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRA
CCHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDL
HHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAWIPGIIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIFFGIGNGGEA
CHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKNPKKTLTRAIQSTIW
EEHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSG
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVY
HHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLIMVLIGMWFN
ECHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDTRISLVVGIIFLAIVTISFYAFGIGKRAPLDVQNNKEISSK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]