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The map label for this gene is ydbT [H]

Identifier: 218230824

GI number: 218230824

Start: 1073800

End: 1075215

Strand: Direct

Name: ydbT [H]

Synonym: BCB4264_A1100

Alternate gene names: 218230824

Gene position: 1073800-1075215 (Clockwise)

Preceding gene: 218235661

Following gene: 218232390

Centisome position: 19.82

GC content: 34.11

Gene sequence:

>1416_bases
ATGTATAAGAGGCAACATCCGATTACGATATTGTTAGGTATTAGGATTGCGAGTTTGTTGCCACTTATTATTCTTGTTTT
ATTTAAACCTGATGAACAAGTGGAACCTTGGTATTTATTTTATCTTTTTCTTCTGGTTGTTTTATTCATCATGGCTATTT
TTTCAGCAATTAAATGGTATTTTAAAGTGTACTGGATTGAGAATAATATTTTACATATAAAGCACGGTGTTTTTGTAAAG
AAGGAAAGCTATTTAAATAAAGAGCGTGTACAAAATATTAGTACGTCTTCTAACATCATTTATCAAATGCTCGGACTTAT
GAAGTTAAATATAGAAGTAGCCGGTGGTGGTAATGAACCAGAAGTGATGTTGGCTGGTATTAAAGAAGACGAGGCAAAAC
ATTTAATTTCTTTATTACATAAGAAAGAAACTACTGTAAAAGAAGAAATAGAAGAGGAAGAAAGCAAGACGGTTTATCAG
TTAACAGCGAAAGAGGTTTTAGCCGCAGCGATTACATCTGGTCGGTTCGGACTAGTGTTCTCTGGACTAGTACTTCTTTA
CACAAAGTTTGATTTTGTTCTTCCTGAAGGATTCACAAGTAAAGTAGAAGCGTATGTGATGGGAAACGGTGTTTATAAAC
TAATTGTAATTGCATTAATTTTAATGGCAATTTCGTGGATTATTTCCACAGCTGGATATGTGTTGAAATATGCAAACTTT
AAAATTGAGCGAAAAGGGGAAGAGATTCGTATCGTTCAAGGATTATTTGAAAAGAAAGAGTTTGTCTTAAAATTGCACCG
CATTCAAGCGATTACTGTAAAAGAAGGTATGCTTCGCCAGCCGTTTGGCTATTGTGCTGTTGAAGTGGAAGCAATTCAAA
GTATTGGAGCAGCAAGTAACGAAGTAATGTTGCATCCATTTATGAAGAAAAAAGATGTACAGCACCTGATCACATATTTA
GAGTTACCATATGAAATCGAAGCGGAGATCGTTCACTTACCAAAAACAGCGTTGCGTCGTTATTTCATTATGGGCTGGTT
AATAAGTATCATACTCACAGTTCTAATTGCCAGCGTGAGTATATATTTTAAACAATATATTGCGTTGTTTGTTATTTTAC
CGTTATTTATCGTGTTTTCGTTACTTGCGTATGCTAGATATAAAAGTGGCGGTTATGAATTAAGAGAAAATCAACTAACG
GTTGTATATCGTAATTTTTCGAAATATACAGGAATAATGCGAAGAAGACATGTTCAAGCAGTAGGTTATAATCAATCGTA
TTTTCAAAGAAAAGATGAATTATGTACAACTCTTGTAGCGGTAGCTGGGCGCGGTTATGAAGTAAAGCATATGAGAAAAA
AAGATTCACTTCGTATATATAATTGGTACAAAGAAAAAGGAAACACCGGTGTGTAA

Upstream 100 bases:

>100_bases
TCAACAGCCGCAACTTCTCATAGTATTCCAGGTTTAACGAAAGAAGAAGCAGAACAGCTGAAAAGACAAATTGGAGAACT
TGCGAAAGTGAGTGATGAGG

Downstream 100 bases:

>100_bases
TGGTGTTTCCTTTTTGTCATTAAATTGATATCTTTAGTCGAATCGTTGATATATTTCAAGATATGATAGATATATTCGGA
AAATCGTTGATATATTTCAA

Product: membrane-flanked domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MYKRQHPITILLGIRIASLLPLIILVLFKPDEQVEPWYLFYLFLLVVLFIMAIFSAIKWYFKVYWIENNILHIKHGVFVK
KESYLNKERVQNISTSSNIIYQMLGLMKLNIEVAGGGNEPEVMLAGIKEDEAKHLISLLHKKETTVKEEIEEEESKTVYQ
LTAKEVLAAAITSGRFGLVFSGLVLLYTKFDFVLPEGFTSKVEAYVMGNGVYKLIVIALILMAISWIISTAGYVLKYANF
KIERKGEEIRIVQGLFEKKEFVLKLHRIQAITVKEGMLRQPFGYCAVEVEAIQSIGAASNEVMLHPFMKKKDVQHLITYL
ELPYEIEAEIVHLPKTALRRYFIMGWLISIILTVLIASVSIYFKQYIALFVILPLFIVFSLLAYARYKSGGYELRENQLT
VVYRNFSKYTGIMRRRHVQAVGYNQSYFQRKDELCTTLVAVAGRGYEVKHMRKKDSLRIYNWYKEKGNTGV

Sequences:

>Translated_471_residues
MYKRQHPITILLGIRIASLLPLIILVLFKPDEQVEPWYLFYLFLLVVLFIMAIFSAIKWYFKVYWIENNILHIKHGVFVK
KESYLNKERVQNISTSSNIIYQMLGLMKLNIEVAGGGNEPEVMLAGIKEDEAKHLISLLHKKETTVKEEIEEEESKTVYQ
LTAKEVLAAAITSGRFGLVFSGLVLLYTKFDFVLPEGFTSKVEAYVMGNGVYKLIVIALILMAISWIISTAGYVLKYANF
KIERKGEEIRIVQGLFEKKEFVLKLHRIQAITVKEGMLRQPFGYCAVEVEAIQSIGAASNEVMLHPFMKKKDVQHLITYL
ELPYEIEAEIVHLPKTALRRYFIMGWLISIILTVLIASVSIYFKQYIALFVILPLFIVFSLLAYARYKSGGYELRENQLT
VVYRNFSKYTGIMRRRHVQAVGYNQSYFQRKDELCTTLVAVAGRGYEVKHMRKKDSLRIYNWYKEKGNTGV
>Mature_471_residues
MYKRQHPITILLGIRIASLLPLIILVLFKPDEQVEPWYLFYLFLLVVLFIMAIFSAIKWYFKVYWIENNILHIKHGVFVK
KESYLNKERVQNISTSSNIIYQMLGLMKLNIEVAGGGNEPEVMLAGIKEDEAKHLISLLHKKETTVKEEIEEEESKTVYQ
LTAKEVLAAAITSGRFGLVFSGLVLLYTKFDFVLPEGFTSKVEAYVMGNGVYKLIVIALILMAISWIISTAGYVLKYANF
KIERKGEEIRIVQGLFEKKEFVLKLHRIQAITVKEGMLRQPFGYCAVEVEAIQSIGAASNEVMLHPFMKKKDVQHLITYL
ELPYEIEAEIVHLPKTALRRYFIMGWLISIILTVLIASVSIYFKQYIALFVILPLFIVFSLLAYARYKSGGYELRENQLT
VVYRNFSKYTGIMRRRHVQAVGYNQSYFQRKDELCTTLVAVAGRGYEVKHMRKKDSLRIYNWYKEKGNTGV

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 54431; Mature: 54431

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKRQHPITILLGIRIASLLPLIILVLFKPDEQVEPWYLFYLFLLVVLFIMAIFSAIKWY
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FKVYWIENNILHIKHGVFVKKESYLNKERVQNISTSSNIIYQMLGLMKLNIEVAGGGNEP
HEEEEEECCEEEEECCEEEEHHHHCCHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCC
EVMLAGIKEDEAKHLISLLHKKETTVKEEIEEEESKTVYQLTAKEVLAAAITSGRFGLVF
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SGLVLLYTKFDFVLPEGFTSKVEAYVMGNGVYKLIVIALILMAISWIISTAGYVLKYANF
HHHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
KIERKGEEIRIVQGLFEKKEFVLKLHRIQAITVKEGMLRQPFGYCAVEVEAIQSIGAASN
EEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHEEHHHHHHCCCCCC
EVMLHPFMKKKDVQHLITYLELPYEIEAEIVHLPKTALRRYFIMGWLISIILTVLIASVS
CEEECCCHHHHHHHHHHHHHCCCCEECHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IYFKQYIALFVILPLFIVFSLLAYARYKSGGYELRENQLTVVYRNFSKYTGIMRRRHVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHH
VGYNQSYFQRKDELCTTLVAVAGRGYEVKHMRKKDSLRIYNWYKEKGNTGV
CCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MYKRQHPITILLGIRIASLLPLIILVLFKPDEQVEPWYLFYLFLLVVLFIMAIFSAIKWY
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FKVYWIENNILHIKHGVFVKKESYLNKERVQNISTSSNIIYQMLGLMKLNIEVAGGGNEP
HEEEEEECCEEEEECCEEEEHHHHCCHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCC
EVMLAGIKEDEAKHLISLLHKKETTVKEEIEEEESKTVYQLTAKEVLAAAITSGRFGLVF
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SGLVLLYTKFDFVLPEGFTSKVEAYVMGNGVYKLIVIALILMAISWIISTAGYVLKYANF
HHHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
KIERKGEEIRIVQGLFEKKEFVLKLHRIQAITVKEGMLRQPFGYCAVEVEAIQSIGAASN
EEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHEEHHHHHHCCCCCC
EVMLHPFMKKKDVQHLITYLELPYEIEAEIVHLPKTALRRYFIMGWLISIILTVLIASVS
CEEECCCHHHHHHHHHHHHHCCCCEECHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IYFKQYIALFVILPLFIVFSLLAYARYKSGGYELRENQLTVVYRNFSKYTGIMRRRHVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHH
VGYNQSYFQRKDELCTTLVAVAGRGYEVKHMRKKDSLRIYNWYKEKGNTGV
CCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]