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The map label for this gene is ylmC [H]

Identifier: 218230763

GI number: 218230763

Start: 3924361

End: 3924642

Strand: Reverse

Name: ylmC [H]

Synonym: BCB4264_A4003

Alternate gene names: 218230763

Gene position: 3924642-3924361 (Counterclockwise)

Preceding gene: 218233406

Following gene: 218231504

Centisome position: 72.42

GC content: 33.69

Gene sequence:

>282_bases
ATGGTGATACGAATTTCAGAGTTACAGATGAAGGATGTTATAAATATTTCAGATGGAAAAAGGATTGGGAATATTGGAGA
TATTGAAATTGATATGAACACAGGGCAAGTTTGTTCTGTTATTATTTCCAAACAGACACGCATGCTGGGTATTTTTGGAA
AGGATGTTGAGATTGTAATTCCTTGGAAGGAAATTGTGAAAATTGGGGAGGATGTCATACTTGTAAGAGTAAATCCTGTT
AATTCTGTAACAGAATCAATACAAACACCGACAATTTCATAA

Upstream 100 bases:

>100_bases
TAGTGTTCATATAATGAAACTAGCATGGTGTTTCGTATAGATGGCTTCCTGTAAATATGAGAAACAGTTTCCAATTTGTC
ATATAAGGGAGAGGATAAAA

Downstream 100 bases:

>100_bases
AGAATATTACAAATTCCTCTTTTTTTTCTGTTAGGATTATGAAAAAATAAAAGTATGGTAAAATAGACAGGAAGTACCAT
GCTTTTTTCTGTTATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVIRISELQMKDVINISDGKRIGNIGDIEIDMNTGQVCSVIISKQTRMLGIFGKDVEIVIPWKEIVKIGEDVILVRVNPV
NSVTESIQTPTIS

Sequences:

>Translated_93_residues
MVIRISELQMKDVINISDGKRIGNIGDIEIDMNTGQVCSVIISKQTRMLGIFGKDVEIVIPWKEIVKIGEDVILVRVNPV
NSVTESIQTPTIS
>Mature_93_residues
MVIRISELQMKDVINISDGKRIGNIGDIEIDMNTGQVCSVIISKQTRMLGIFGKDVEIVIPWKEIVKIGEDVILVRVNPV
NSVTESIQTPTIS

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ylmC/ymxH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033
- InterPro:   IPR014238 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 10293; Mature: 10293

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRISELQMKDVINISDGKRIGNIGDIEIDMNTGQVCSVIISKQTRMLGIFGKDVEIVI
CEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCEEEEE
PWKEIVKIGEDVILVRVNPVNSVTESIQTPTIS
CHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure
MVIRISELQMKDVINISDGKRIGNIGDIEIDMNTGQVCSVIISKQTRMLGIFGKDVEIVI
CEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCEEEEE
PWKEIVKIGEDVILVRVNPVNSVTESIQTPTIS
CHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]