| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is engB
Identifier: 21674964
GI number: 21674964
Start: 2043126
End: 2043704
Strand: Reverse
Name: engB
Synonym: CT2155
Alternate gene names: 21674964
Gene position: 2043704-2043126 (Counterclockwise)
Preceding gene: 21674966
Following gene: 21674963
Centisome position: 94.84
GC content: 53.54
Gene sequence:
>579_bases ATGAACATTACCACCGCTGATTTTTTCTGTAGTTATTCGAGCTTGAACGGACTTCCATCAGACGGAAGGCCGGAGATCGT TTTCGTGGGGCGCTCCAATGTCGGTAAATCCTCGCTGCTGAATTCGCTTTGCGCCCGCAAAGGGCTGGCCAAGACCAGCT CGACGCCGGGAAAGACGCGGCTTATCAACTATTTCATTATCAACGACAATCTGTACTTCGTTGATTTGCCGGGGTATGGG TATGCCAAGGTCGGGCAGGGTGAGCGTGAGAGCTGGGGGAAGCTGCTGACGGGCTACATCCAGAAGCGTGGCGAGATCGC GCTCGTGGTGCTGCTGGTGGATTCGCGGCATCCGGGGATGGCCTCCGACCTGGAGATGATGGAATTTCTTGACTATTGCG GGCGGCCGTTTGGCATCGTGCTCACCAAGTGGGATAAACTCAAGCAGGCCGAAAAGTCGAAAGCCAGTCGCACGATTGAA AGTTGTGCACCGAATGCCAGATTTATTGTAAATTATTCGTCTTTGTCGGGCAGTGGCCGGGACAGGCTTCTGGCTTCGAT CGATACTTTTACTCAGTAA
Upstream 100 bases:
>100_bases TTGGGATTTCCCTCCGCTATTGTTTAGCTTCACCCCTTTGGCAACCAGCACGAGGCGCAGACCATTTCTATCTGAGCTTC TTTACTCTTCACCCGCGTCC
Downstream 100 bases:
>100_bases AAACAAGCGACGTGGAAGAAAAAATATTCAGCAGGCCGGCAGCGTCTGCTACCGTGCTTGTGGGCACGCAGTTCGGCGAC GAGGGCAAAGGCAAGCTGGT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFIINDNLYFVDLPGYG YAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIE SCAPNARFIVNYSSLSGSGRDRLLASIDTFTQ
Sequences:
>Translated_192_residues MNITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFIINDNLYFVDLPGYG YAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIE SCAPNARFIVNYSSLSGSGRDRLLASIDTFTQ >Mature_192_residues MNITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFIINDNLYFVDLPGYG YAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIE SCAPNARFIVNYSSLSGSGRDRLLASIDTFTQ
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=153, Percent_Identity=34.640522875817, Blast_Score=84, Evalue=7e-17, Organism=Escherichia coli, GI145693205, Length=193, Percent_Identity=40.4145077720207, Blast_Score=132, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320543, Length=140, Percent_Identity=31.4285714285714, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_CHLTE (Q8KAK5)
Other databases:
- EMBL: AE006470 - RefSeq: NP_663029.1 - ProteinModelPortal: Q8KAK5 - SMR: Q8KAK5 - GeneID: 1007404 - GenomeReviews: AE006470_GR - KEGG: cte:CT2155 - NMPDR: fig|194439.1.peg.2123 - TIGR: CT2155 - HOGENOM: HBG447097 - OMA: FIVNYSS - ProtClustDB: PRK00454 - BioCyc: CTEP194439:CT_2155-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 21171; Mature: 21171
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTR CCCCCHHHEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEE LINYFIINDNLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGM EEEEEEEECCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC ASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIESCAPNARFIVNYSSLSGSGR HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH DRLLASIDTFTQ HHHEEHHHHCCC >Mature Secondary Structure MNITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTR CCCCCHHHEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEE LINYFIINDNLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGM EEEEEEEECCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC ASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIESCAPNARFIVNYSSLSGSGR HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH DRLLASIDTFTQ HHHEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901