| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yqgV [H]
Identifier: 21674962
GI number: 21674962
Start: 2041233
End: 2041667
Strand: Reverse
Name: yqgV [H]
Synonym: CT2153
Alternate gene names: 21674962
Gene position: 2041667-2041233 (Counterclockwise)
Preceding gene: 21674963
Following gene: 21674961
Centisome position: 94.74
GC content: 52.64
Gene sequence:
>435_bases ATGTATGGGTATATGTCCATCTTGTCAGGACTCTCAAAAGTTGCTCCGGACTTTAGTCCGGGGTTTATGAATAACGCAAA ACAGACAAGGGCTTTAGCCCAATTTTATTTCGGTAGCGGCATGGCTCTTCTCGAAATCACGGTAATTCCGCTTGGTACGG TGGGCAGCGGTTTGAGTGCCTGGATTGCAGGACTCGAGTCGCTGCTCGAAGAGAGTTGTCTGCCCTTCCGGCTGAACGAC ATGGGCACTATCGTTGAAGGTTCGGCGGACGAGCTGTTCGCCATTGCCCGAAAGCTTCACGAATACTGCTTTGTCGAGGG TGTGGCGAGGGTCTACACCGTGATGAAGATCGACGATCGTCGCGACAAATCGGTAGCCATTGGTGACAAGGTTGCGTCGG TCGAGGCCCGGAAAGCGGTTAAGCCGGATAAATGA
Upstream 100 bases:
>100_bases CCGGCGTGAAAGCCGGGGCAACATGAATGCAAGAGGGGATGAATGTCCGTCGGGCTGGACCCCTCCTGAGAGTATGAGAA TGCCGGGGTAATTGAACGGC
Downstream 100 bases:
>100_bases AAAAATATTTTTATTTTCGAGTTCTCAATTTCCAGGGTTGAGCGCCCGGAGCCATTTCGGAGCAGCCAGCACCATCCTAT AAAGTCATACTGCCATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MYGYMSILSGLSKVAPDFSPGFMNNAKQTRALAQFYFGSGMALLEITVIPLGTVGSGLSAWIAGLESLLEESCLPFRLND MGTIVEGSADELFAIARKLHEYCFVEGVARVYTVMKIDDRRDKSVAIGDKVASVEARKAVKPDK
Sequences:
>Translated_144_residues MYGYMSILSGLSKVAPDFSPGFMNNAKQTRALAQFYFGSGMALLEITVIPLGTVGSGLSAWIAGLESLLEESCLPFRLND MGTIVEGSADELFAIARKLHEYCFVEGVARVYTVMKIDDRRDKSVAIGDKVASVEARKAVKPDK >Mature_144_residues MYGYMSILSGLSKVAPDFSPGFMNNAKQTRALAQFYFGSGMALLEITVIPLGTVGSGLSAWIAGLESLLEESCLPFRLND MGTIVEGSADELFAIARKLHEYCFVEGVARVYTVMKIDDRRDKSVAIGDKVASVEARKAVKPDK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 15632; Mature: 15632
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGYMSILSGLSKVAPDFSPGFMNNAKQTRALAQFYFGSGMALLEITVIPLGTVGSGLSA CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHH WIAGLESLLEESCLPFRLNDMGTIVEGSADELFAIARKLHEYCFVEGVARVYTVMKIDDR HHHHHHHHHHHCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDKSVAIGDKVASVEARKAVKPDK CCCCEECCCHHHHHHHHHCCCCCC >Mature Secondary Structure MYGYMSILSGLSKVAPDFSPGFMNNAKQTRALAQFYFGSGMALLEITVIPLGTVGSGLSA CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHH WIAGLESLLEESCLPFRLNDMGTIVEGSADELFAIARKLHEYCFVEGVARVYTVMKIDDR HHHHHHHHHHHCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDKSVAIGDKVASVEARKAVKPDK CCCCEECCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]