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The map label for this gene is 21674859

Identifier: 21674859

GI number: 21674859

Start: 1947364

End: 1948716

Strand: Reverse

Name: 21674859

Synonym: CT2049

Alternate gene names: NA

Gene position: 1948716-1947364 (Counterclockwise)

Preceding gene: 21674860

Following gene: 21674858

Centisome position: 90.43

GC content: 60.01

Gene sequence:

>1353_bases
ATGACCAAGAAGTCAACCAGACGGTTTTTCGCCCTGCTCGTGGCGGTTGTCGCCACCTGTTCGCAGGCCGATGCGGCCAC
CATGAGGCTGTCGCTCAGCGACGCCCTGAAGATGGCTCACGAGCGGAACACCATGCTCAAGGCGGCACGCGCCAAAAATG
ACCAGGCCGATGCGCGCGTCGTGCAGAGCCGCCAGGCCTACCTGCCGAAAGTGACGCTCTCCGAAACCCTGCTACACTCC
AACGATCCCGGCGCGGTGCTGGTGGGCAAGCTCCAGCAGGAGATTGCCTACTACAATTTTAATACGACTCCGCCCGATTT
TGGTGACTTTTCGCTGCACAACCTCAACCATCCTTCGGCGATTACCGATTTTCACACCAGCCTCCAGGTGCAGCAGCCGA
TCTACAATCGCGACGCGATCATTGGCGGCAAGATGGCCCGGAGCGCGCGTAAGGCACAGGGCTTTATGACCGATCGCGCG
GTGGAGAGCATTGACCTGAATGTCAAGAAGGCTTTTTACGGTCTCATTCTGGCCAAGAAGAATCTCGATGCCATCGAGCA
GTCGATCCGCATCATGCAGGGCTACAGCAGCGAGGCCGCGCGTGGTTACGCTGCCGGGCTGGTGACCAAGTCCGACAAGC
TCTCCACCGAAGTGCGGCTTGCCGAGCTGCGCGATCAGAAGCTCCAGATTCAGGACGCCATCCGCAACGCGCAGGATGCA
CTCCGCACGATACTGGCGCTCGGTCCGGACGATACCATCCAGCCAATCGGCGACCTCGCCGTCGATGCCAGAATTCCGGC
TTCGGCTGCAAAGGCCAGCGCCGAGGGGCGTAGCGACCTCAAGGCGCTTGCCGCATTCCAGGAGGTCGCCGGCTATCAGC
ATGACATGGCTCGCGCGCAGTACCTGCCGAGGGTGAACGCTTTCGCCCAGCAGAACTGGCATGACAGCAGCTTCCTCGGC
ACGGAGGGATCGAGCTGGACCATTGGCCTGAACGTGCAGTGGAACATCTTCGACGGCATGGCCACCAAAGGCAAAGTGCA
GGAGACCAAGGCCCAGGAGCTGGAGGCCCGCTACAACTACCAGGCCGCCAAAGAGCAGAGCGAGATGGAGATCGACATGG
CCCGTCGCGCGCTGGTGACATCGCGCGAGCGGATCGCCGTCACGCAGAAGTCGCTCGAAGCAGCAAAGGTCAGTTTCGAC
TTCATAGGCGAGCAGTTCAGAACCGGTATGGCGATGACCTTTGAACTTCTGATGCGCGAACAGGCATGGACCTGGGCGAA
GATGAGCCTCAACCAGGCGAAGTATGATTACTGCATCGCCAAAAGCGAGCTGGAATATTACAGCGCTCATTGA

Upstream 100 bases:

>100_bases
CACCTTTTCCCTCGTGCTGAACCGTAATTTGCAGAATTGCCTGAACCGTCACGATTCAGGAAGTGTGGAAAAGATTATCA
AACTCATATCGAAAAAATAG

Downstream 100 bases:

>100_bases
ATTTTTTTCAGTCGTGACAGCAAAACTGAAAACCATGAAAGGTATGAGCACCCGAATCATCGTGCCGCTTTTTCTGCTGC
TGCCCGCGCTGCTTGGCGCA

Product: LipD protein, putative

Products: NA

Alternate protein names: LipD Protein; Outer Membrane Protein; Type I Secretion Outer Membrane Protein lC Family; Outer Membrane Efflux Family Protein; Outer Membrane Protein lC; Outer Membrane Macrolide Efflux Protein; Acriflavin Resistance Protein; Outer Membrane Protein-Like; RND Family Efflux Pump Outer Membrane Protein; Type I Secretion Outer Membrane Protein; Outer Membrane Protein CyaE

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MTKKSTRRFFALLVAVVATCSQADAATMRLSLSDALKMAHERNTMLKAARAKNDQADARVVQSRQAYLPKVTLSETLLHS
NDPGAVLVGKLQQEIAYYNFNTTPPDFGDFSLHNLNHPSAITDFHTSLQVQQPIYNRDAIIGGKMARSARKAQGFMTDRA
VESIDLNVKKAFYGLILAKKNLDAIEQSIRIMQGYSSEAARGYAAGLVTKSDKLSTEVRLAELRDQKLQIQDAIRNAQDA
LRTILALGPDDTIQPIGDLAVDARIPASAAKASAEGRSDLKALAAFQEVAGYQHDMARAQYLPRVNAFAQQNWHDSSFLG
TEGSSWTIGLNVQWNIFDGMATKGKVQETKAQELEARYNYQAAKEQSEMEIDMARRALVTSRERIAVTQKSLEAAKVSFD
FIGEQFRTGMAMTFELLMREQAWTWAKMSLNQAKYDYCIAKSELEYYSAH

Sequences:

>Translated_450_residues
MTKKSTRRFFALLVAVVATCSQADAATMRLSLSDALKMAHERNTMLKAARAKNDQADARVVQSRQAYLPKVTLSETLLHS
NDPGAVLVGKLQQEIAYYNFNTTPPDFGDFSLHNLNHPSAITDFHTSLQVQQPIYNRDAIIGGKMARSARKAQGFMTDRA
VESIDLNVKKAFYGLILAKKNLDAIEQSIRIMQGYSSEAARGYAAGLVTKSDKLSTEVRLAELRDQKLQIQDAIRNAQDA
LRTILALGPDDTIQPIGDLAVDARIPASAAKASAEGRSDLKALAAFQEVAGYQHDMARAQYLPRVNAFAQQNWHDSSFLG
TEGSSWTIGLNVQWNIFDGMATKGKVQETKAQELEARYNYQAAKEQSEMEIDMARRALVTSRERIAVTQKSLEAAKVSFD
FIGEQFRTGMAMTFELLMREQAWTWAKMSLNQAKYDYCIAKSELEYYSAH
>Mature_449_residues
TKKSTRRFFALLVAVVATCSQADAATMRLSLSDALKMAHERNTMLKAARAKNDQADARVVQSRQAYLPKVTLSETLLHSN
DPGAVLVGKLQQEIAYYNFNTTPPDFGDFSLHNLNHPSAITDFHTSLQVQQPIYNRDAIIGGKMARSARKAQGFMTDRAV
ESIDLNVKKAFYGLILAKKNLDAIEQSIRIMQGYSSEAARGYAAGLVTKSDKLSTEVRLAELRDQKLQIQDAIRNAQDAL
RTILALGPDDTIQPIGDLAVDARIPASAAKASAEGRSDLKALAAFQEVAGYQHDMARAQYLPRVNAFAQQNWHDSSFLGT
EGSSWTIGLNVQWNIFDGMATKGKVQETKAQELEARYNYQAAKEQSEMEIDMARRALVTSRERIAVTQKSLEAAKVSFDF
IGEQFRTGMAMTFELLMREQAWTWAKMSLNQAKYDYCIAKSELEYYSAH

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50089; Mature: 49958

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKSTRRFFALLVAVVATCSQADAATMRLSLSDALKMAHERNTMLKAARAKNDQADARV
CCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VQSRQAYLPKVTLSETLLHSNDPGAVLVGKLQQEIAYYNFNTTPPDFGDFSLHNLNHPSA
HHHHHHHCCCCHHHHHHHCCCCCCEEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCH
ITDFHTSLQVQQPIYNRDAIIGGKMARSARKAQGFMTDRAVESIDLNVKKAFYGLILAKK
HHHHHHHHEECCCCCCCCCEECHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHC
NLDAIEQSIRIMQGYSSEAARGYAAGLVTKSDKLSTEVRLAELRDQKLQIQDAIRNAQDA
CHHHHHHHHHHHHCCCCHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTILALGPDDTIQPIGDLAVDARIPASAAKASAEGRSDLKALAAFQEVAGYQHDMARAQ
HHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
YLPRVNAFAQQNWHDSSFLGTEGSSWTIGLNVQWNIFDGMATKGKVQETKAQELEARYNY
HCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCH
QAAKEQSEMEIDMARRALVTSRERIAVTQKSLEAAKVSFDFIGEQFRTGMAMTFELLMRE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QAWTWAKMSLNQAKYDYCIAKSELEYYSAH
HCCHHHHHHHCHHHHHHHEEHHHHHHHCCC
>Mature Secondary Structure 
TKKSTRRFFALLVAVVATCSQADAATMRLSLSDALKMAHERNTMLKAARAKNDQADARV
CCHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VQSRQAYLPKVTLSETLLHSNDPGAVLVGKLQQEIAYYNFNTTPPDFGDFSLHNLNHPSA
HHHHHHHCCCCHHHHHHHCCCCCCEEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCH
ITDFHTSLQVQQPIYNRDAIIGGKMARSARKAQGFMTDRAVESIDLNVKKAFYGLILAKK
HHHHHHHHEECCCCCCCCCEECHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHC
NLDAIEQSIRIMQGYSSEAARGYAAGLVTKSDKLSTEVRLAELRDQKLQIQDAIRNAQDA
CHHHHHHHHHHHHCCCCHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTILALGPDDTIQPIGDLAVDARIPASAAKASAEGRSDLKALAAFQEVAGYQHDMARAQ
HHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
YLPRVNAFAQQNWHDSSFLGTEGSSWTIGLNVQWNIFDGMATKGKVQETKAQELEARYNY
HCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCH
QAAKEQSEMEIDMARRALVTSRERIAVTQKSLEAAKVSFDFIGEQFRTGMAMTFELLMRE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QAWTWAKMSLNQAKYDYCIAKSELEYYSAH
HCCHHHHHHHCHHHHHHHEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA