Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674858

Identifier: 21674858

GI number: 21674858

Start: 1946895

End: 1947413

Strand: Reverse

Name: 21674858

Synonym: CT2048

Alternate gene names: NA

Gene position: 1947413-1946895 (Counterclockwise)

Preceding gene: 21674859

Following gene: 21674857

Centisome position: 90.37

GC content: 57.42

Gene sequence:

>519_bases
ATGATTACTGCATCGCCAAAAGCGAGCTGGAATATTACAGCGCTCATTGAATTTTTTTCAGTCGTGACAGCAAAACTGAA
AACCATGAAAGGTATGAGCACCCGAATCATCGTGCCGCTTTTTCTGCTGCTGCCCGCGCTGCTTGGCGCATGTGGCGGCC
ATAAAAAGGAGCAGACGCCATCGTCATCAACCACGGCCACGGCTCCCGCTATTGCCGCAAAGGTCGCGACCGTCACGGAG
TCCGCTGACGCCGCTGGCCGGAAGATTTTGCTCGTGCCGACCTCATCGGTATTCAGAAAAGCGGGCACTGACCAGGTCTT
CGTCGTCCGTCCCGACAGCATCGTCACGCTGCGCTGGGTCAGCACCGGCCACACGCAGGGTGCAAGCACCATCGTGCTCA
GCGGCCTCGACAAGGGTGAAACCGTCGTCGAGTCTCCCTCGGCGGATTTGAGGGAGGGCGCAAGGATTTCTACAGACACG
CACACAGAAGACAGAGCGAAGGAGGCTCAACACCAATGA

Upstream 100 bases:

>100_bases
ATAGGCGAGCAGTTCAGAACCGGTATGGCGATGACCTTTGAACTTCTGATGCGCGAACAGGCATGGACCTGGGCGAAGAT
GAGCCTCAACCAGGCGAAGT

Downstream 100 bases:

>100_bases
ATGAAGGTATAGCCGGCAGGCTTGCAAAGCAGTTTATCAACTCGAAGATAACGCCGCTCCTCATGCTGGCCTCTCTTCTG
GTCGGCATCATGGCGACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MITASPKASWNITALIEFFSVVTAKLKTMKGMSTRIIVPLFLLLPALLGACGGHKKEQTPSSSTTATAPAIAAKVATVTE
SADAAGRKILLVPTSSVFRKAGTDQVFVVRPDSIVTLRWVSTGHTQGASTIVLSGLDKGETVVESPSADLREGARISTDT
HTEDRAKEAQHQ

Sequences:

>Translated_172_residues
MITASPKASWNITALIEFFSVVTAKLKTMKGMSTRIIVPLFLLLPALLGACGGHKKEQTPSSSTTATAPAIAAKVATVTE
SADAAGRKILLVPTSSVFRKAGTDQVFVVRPDSIVTLRWVSTGHTQGASTIVLSGLDKGETVVESPSADLREGARISTDT
HTEDRAKEAQHQ
>Mature_172_residues
MITASPKASWNITALIEFFSVVTAKLKTMKGMSTRIIVPLFLLLPALLGACGGHKKEQTPSSSTTATAPAIAAKVATVTE
SADAAGRKILLVPTSSVFRKAGTDQVFVVRPDSIVTLRWVSTGHTQGASTIVLSGLDKGETVVESPSADLREGARISTDT
HTEDRAKEAQHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18128; Mature: 18128

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITASPKASWNITALIEFFSVVTAKLKTMKGMSTRIIVPLFLLLPALLGACGGHKKEQTP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSSTTATAPAIAAKVATVTESADAAGRKILLVPTSSVFRKAGTDQVFVVRPDSIVTLRWV
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCEEEEECCCCEEEEEEE
STGHTQGASTIVLSGLDKGETVVESPSADLREGARISTDTHTEDRAKEAQHQ
ECCCCCCCCEEEEECCCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MITASPKASWNITALIEFFSVVTAKLKTMKGMSTRIIVPLFLLLPALLGACGGHKKEQTP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSSTTATAPAIAAKVATVTESADAAGRKILLVPTSSVFRKAGTDQVFVVRPDSIVTLRWV
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCEEEEECCCCEEEEEEE
STGHTQGASTIVLSGLDKGETVVESPSADLREGARISTDTHTEDRAKEAQHQ
ECCCCCCCCEEEEECCCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA