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The map label for this gene is ygbT [H]

Identifier: 21674788

GI number: 21674788

Start: 1876089

End: 1876979

Strand: Direct

Name: ygbT [H]

Synonym: CT1977

Alternate gene names: 21674788

Gene position: 1876089-1876979 (Clockwise)

Preceding gene: 21674787

Following gene: 21674789

Centisome position: 87.06

GC content: 57.91

Gene sequence:

>891_bases
ATGAAGAGTAACACACTCGGCGACGAAGGAAATCCGGCCCGGCTCTTGATAAAAGTGACGCGGGAGACCCTTCCGCAGGT
CAAGGAAAAGTATCCGTTTCTGTATCTTGAGAAGGGCCGGATAGAGATTGACGACAGCAGCATCAAGTGGATCGACTGCG
ACTGCAACGTCGTGCGTCTGCCGGTGGCCATGCTGAACTGTATTTTGCTCGGCCCCGGCACGACGGTAACGCACGAGGCC
GTAAAAGTAATGGCCGCCGCCAATTGCGGCATCTGCTGGGTGGGCGACGACAGCCTGATGTTTTACGCGAGCGGGCAGAC
GCCGACCAGCAATACGCGGAACATGACGCATCAGATGAAGCTCGCGGCCAATCCGGCAAAAGCGCTTGAAGTGGCGCGGC
GGCTCTTCGCCTATCGCTTTCCGGACGCGAATCTGGAGAACAAGACGCTGCCGCAAATGATGGGCATGGAGGGTTTGCGG
GTGCGGAAGCTTTACGAAGAGATGGCCGTGAAGTACAAGGTCGGCTGGAAGGGGCGGCGGTTCGAGCCGGGAAAATTCGA
AATGAGCGACACGACGAACAAGATTCTGACGGCGTCGAACGCGGCGCTGTACAGCATCATTCTGTCGGCGGTGCACAGCA
TGGGTTACTCGCCGCACATCGGGTTCATTCACTCCGGCAGTCCGCTACCGTTCATTTACGACCTGGCCGATCTGTACAAG
CAGCAGGTCTCGATCGACCTGGCCTTTTCGCTGACCGCCGACATGGCCGGGTATTACGACCGGCACAAGATCGCCTCGGA
GTTCCGGAAGCGCGTCATCGAAATCGACCTGCTTGGCAAGATCGGGCCGGACATCGAAACCATTCTGGGGAAAAAACAAT
GCTCGTCGTAG

Upstream 100 bases:

>100_bases
GAAGGCGAGGCGGAGGTGGTGGCACTCAACGACGTGCCGGTGCGGTTCGGCCCAAAGAAAAAATATCGCCAGCGGCGAGT
AACCATAATCCACCACAACG

Downstream 100 bases:

>100_bases
TCGCCAATGATCTGCCCCCGGCCGTGCGTGGCCGGATGAAGCTCTGGTTCATCGAACCACGGGCGAACGTTTTCGTCTCT
GGTGTGCGGGACAGCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKSNTLGDEGNPARLLIKVTRETLPQVKEKYPFLYLEKGRIEIDDSSIKWIDCDCNVVRLPVAMLNCILLGPGTTVTHEA
VKVMAAANCGICWVGDDSLMFYASGQTPTSNTRNMTHQMKLAANPAKALEVARRLFAYRFPDANLENKTLPQMMGMEGLR
VRKLYEEMAVKYKVGWKGRRFEPGKFEMSDTTNKILTASNAALYSIILSAVHSMGYSPHIGFIHSGSPLPFIYDLADLYK
QQVSIDLAFSLTADMAGYYDRHKIASEFRKRVIEIDLLGKIGPDIETILGKKQCSS

Sequences:

>Translated_296_residues
MKSNTLGDEGNPARLLIKVTRETLPQVKEKYPFLYLEKGRIEIDDSSIKWIDCDCNVVRLPVAMLNCILLGPGTTVTHEA
VKVMAAANCGICWVGDDSLMFYASGQTPTSNTRNMTHQMKLAANPAKALEVARRLFAYRFPDANLENKTLPQMMGMEGLR
VRKLYEEMAVKYKVGWKGRRFEPGKFEMSDTTNKILTASNAALYSIILSAVHSMGYSPHIGFIHSGSPLPFIYDLADLYK
QQVSIDLAFSLTADMAGYYDRHKIASEFRKRVIEIDLLGKIGPDIETILGKKQCSS
>Mature_296_residues
MKSNTLGDEGNPARLLIKVTRETLPQVKEKYPFLYLEKGRIEIDDSSIKWIDCDCNVVRLPVAMLNCILLGPGTTVTHEA
VKVMAAANCGICWVGDDSLMFYASGQTPTSNTRNMTHQMKLAANPAKALEVARRLFAYRFPDANLENKTLPQMMGMEGLR
VRKLYEEMAVKYKVGWKGRRFEPGKFEMSDTTNKILTASNAALYSIILSAVHSMGYSPHIGFIHSGSPLPFIYDLADLYK
QQVSIDLAFSLTADMAGYYDRHKIASEFRKRVIEIDLLGKIGPDIETILGKKQCSS

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=263, Percent_Identity=34.2205323193916, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33100; Mature: 33100

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNTLGDEGNPARLLIKVTRETLPQVKEKYPFLYLEKGRIEIDDSSIKWIDCDCNVVRL
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCEEEH
PVAMLNCILLGPGTTVTHEAVKVMAAANCGICWVGDDSLMFYASGQTPTSNTRNMTHQMK
HHHHHCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHEEE
LAANPAKALEVARRLFAYRFPDANLENKTLPQMMGMEGLRVRKLYEEMAVKYKVGWKGRR
ECCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHEEEEECCCCCC
FEPGKFEMSDTTNKILTASNAALYSIILSAVHSMGYSPHIGFIHSGSPLPFIYDLADLYK
CCCCCEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
QQVSIDLAFSLTADMAGYYDRHKIASEFRKRVIEIDLLGKIGPDIETILGKKQCSS
HHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHCHHHCCC
>Mature Secondary Structure
MKSNTLGDEGNPARLLIKVTRETLPQVKEKYPFLYLEKGRIEIDDSSIKWIDCDCNVVRL
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCEEEH
PVAMLNCILLGPGTTVTHEAVKVMAAANCGICWVGDDSLMFYASGQTPTSNTRNMTHQMK
HHHHHCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHEEE
LAANPAKALEVARRLFAYRFPDANLENKTLPQMMGMEGLRVRKLYEEMAVKYKVGWKGRR
ECCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHEEEEECCCCCC
FEPGKFEMSDTTNKILTASNAALYSIILSAVHSMGYSPHIGFIHSGSPLPFIYDLADLYK
CCCCCEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
QQVSIDLAFSLTADMAGYYDRHKIASEFRKRVIEIDLLGKIGPDIETILGKKQCSS
HHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]