Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674787

Identifier: 21674787

GI number: 21674787

Start: 1875383

End: 1876099

Strand: Direct

Name: 21674787

Synonym: CT1976

Alternate gene names: NA

Gene position: 1875383-1876099 (Clockwise)

Preceding gene: 21674786

Following gene: 21674788

Centisome position: 87.03

GC content: 64.44

Gene sequence:

>717_bases
ATGAGCAATCCATTCATCCTGTTATGGCTCGAAGCGCCCCTCCAGTCGTGGGGCGCTGACTCGCGCTTCGGACGGCGCGA
CACGCTCGATTTCCCCACGAAGTCGGGCTTGCTCGGGCTGCTCTGCTGCGCCCTCGGCGCGGGCGGCGAACAGCGCGAAC
TACTCGACGAAATGGCCGAACTCCGCCAGACGGTGCTCGCGTTCCAGCGCGAACGCGGCGAGCGACCGCCGCTGCTCCGC
GACTTCCAGATGGTCGGCAGCGGCTACAACGAGAAAGACAAGTGGGAAACTTTGCTGATTCCGAAAAAGCGCGATGGCGG
CGGCGCGGTGGGCGGCGGCACGAAGATGACCTACCGTTACTATTTGCAGGAGGCCGCGTTCGCCGCCGCATTGGAGGTTC
CGGCGGCACGGGCCGGGGAGTTCGCCGAAGCGCTTAAGGCTCCCGTGTGGGACATCTACTTCGGGCGGAAGTGCTGCGCG
CCGACCGATATGGTGTTCCGGGGCGAATTCGACTCGGAGGTGGCAGCGCTCGAAGCGGCCTCTTCGATCGCCAAAGAGAA
GCGGCTCCGGGAGGCGTTCCGCGTTCGCGACTACGCGCCGGGCGACGAAGGCGAGGCGGAGGTGGTGGCACTCAACGACG
TGCCGGTGCGGTTCGGCCCAAAGAAAAAATATCGCCAGCGGCGAGTAACCATAATCCACCACAACGATGAAGAGTAA

Upstream 100 bases:

>100_bases
TCTTCGGCAAGGAAAAGGAGTTCACCTTCGGCGGCGAGGACGAAACGTTCAGCATCGACACGCTGGTCAGCGAAATCCGC
AACTTTATCGAAGCGAAATC

Downstream 100 bases:

>100_bases
CACACTCGGCGACGAAGGAAATCCGGCCCGGCTCTTGATAAAAGTGACGCGGGAGACCCTTCCGCAGGTCAAGGAAAAGT
ATCCGTTTCTGTATCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Ecoli Subtype

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLR
DFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCA
PTDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE

Sequences:

>Translated_238_residues
MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLR
DFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCA
PTDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE
>Mature_237_residues
SNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLRD
FQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAP
TDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26651; Mature: 26519

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAE
CCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LRQTVLAFQRERGERPPLLRDFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRY
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
YLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAPTDMVFRGEFDSEVAALEAA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH
SSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCC
>Mature Secondary Structure 
SNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAE
CCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LRQTVLAFQRERGERPPLLRDFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRY
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
YLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAPTDMVFRGEFDSEVAALEAA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH
SSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA