| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674787
Identifier: 21674787
GI number: 21674787
Start: 1875383
End: 1876099
Strand: Direct
Name: 21674787
Synonym: CT1976
Alternate gene names: NA
Gene position: 1875383-1876099 (Clockwise)
Preceding gene: 21674786
Following gene: 21674788
Centisome position: 87.03
GC content: 64.44
Gene sequence:
>717_bases ATGAGCAATCCATTCATCCTGTTATGGCTCGAAGCGCCCCTCCAGTCGTGGGGCGCTGACTCGCGCTTCGGACGGCGCGA CACGCTCGATTTCCCCACGAAGTCGGGCTTGCTCGGGCTGCTCTGCTGCGCCCTCGGCGCGGGCGGCGAACAGCGCGAAC TACTCGACGAAATGGCCGAACTCCGCCAGACGGTGCTCGCGTTCCAGCGCGAACGCGGCGAGCGACCGCCGCTGCTCCGC GACTTCCAGATGGTCGGCAGCGGCTACAACGAGAAAGACAAGTGGGAAACTTTGCTGATTCCGAAAAAGCGCGATGGCGG CGGCGCGGTGGGCGGCGGCACGAAGATGACCTACCGTTACTATTTGCAGGAGGCCGCGTTCGCCGCCGCATTGGAGGTTC CGGCGGCACGGGCCGGGGAGTTCGCCGAAGCGCTTAAGGCTCCCGTGTGGGACATCTACTTCGGGCGGAAGTGCTGCGCG CCGACCGATATGGTGTTCCGGGGCGAATTCGACTCGGAGGTGGCAGCGCTCGAAGCGGCCTCTTCGATCGCCAAAGAGAA GCGGCTCCGGGAGGCGTTCCGCGTTCGCGACTACGCGCCGGGCGACGAAGGCGAGGCGGAGGTGGTGGCACTCAACGACG TGCCGGTGCGGTTCGGCCCAAAGAAAAAATATCGCCAGCGGCGAGTAACCATAATCCACCACAACGATGAAGAGTAA
Upstream 100 bases:
>100_bases TCTTCGGCAAGGAAAAGGAGTTCACCTTCGGCGGCGAGGACGAAACGTTCAGCATCGACACGCTGGTCAGCGAAATCCGC AACTTTATCGAAGCGAAATC
Downstream 100 bases:
>100_bases CACACTCGGCGACGAAGGAAATCCGGCCCGGCTCTTGATAAAAGTGACGCGGGAGACCCTTCCGCAGGTCAAGGAAAAGT ATCCGTTTCTGTATCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Ecoli Subtype
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLR DFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCA PTDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE
Sequences:
>Translated_238_residues MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLR DFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCA PTDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE >Mature_237_residues SNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAELRQTVLAFQRERGERPPLLRD FQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRYYLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAP TDMVFRGEFDSEVAALEAASSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26651; Mature: 26519
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAE CCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH LRQTVLAFQRERGERPPLLRDFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRY HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH YLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAPTDMVFRGEFDSEVAALEAA HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH SSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCC >Mature Secondary Structure SNPFILLWLEAPLQSWGADSRFGRRDTLDFPTKSGLLGLLCCALGAGGEQRELLDEMAE CCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH LRQTVLAFQRERGERPPLLRDFQMVGSGYNEKDKWETLLIPKKRDGGGAVGGGTKMTYRY HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH YLQEAAFAAALEVPAARAGEFAEALKAPVWDIYFGRKCCAPTDMVFRGEFDSEVAALEAA HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH SSIAKEKRLREAFRVRDYAPGDEGEAEVVALNDVPVRFGPKKKYRQRRVTIIHHNDEE HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA