| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pqqL [C]
Identifier: 21674744
GI number: 21674744
Start: 1826768
End: 1828096
Strand: Direct
Name: pqqL [C]
Synonym: CT1932
Alternate gene names: 21674744
Gene position: 1826768-1828096 (Clockwise)
Preceding gene: 21674737
Following gene: 21674746
Centisome position: 84.77
GC content: 56.96
Gene sequence:
>1329_bases TTGCACCCAAATCCATCCGCAATCGTGAGAAAAAATATCGTATCGCCCTCCATCGGCAACGCCACACACCCTGCAGAACG CCTCTCAACCGGCATTGTCGAAAGTGGAACCCTTCCCAACGGCCTGCGCATCGTCAGCAATCAGGTGCCCTGGATTCACA GCGTCACGCTTGGCTTGTGGATCAACGCCGGTTCGCGCGAAGATCCCGAAGGATTCGAGGGTATGGCCCATTTCATCGAA CACGCACTTTTCAAGGGCACGCAAAAGCGTGACTACGTCGAGATTGCCCGCTGCGTCGAAGAAACCGGTGGCTATATCGA CGCCTGGACCACCAAGGAGCAGACCTGCCTGTGCGTCAGGTGCCTCCGGGAGCATCTGCATCTGGCTTTTGACCTGCTCG CCGATCTCTGCTGTAATCCGGTTTTTCCGCCCGACGAGATCGAGAAAGAAAAAGAGGTGGTGCTCGAAGAGATCGCCAGT GTGAACGACACCCCGGAAGAGCTGATCTTCGAGGATTTCGACCGCCGCGCCTTTTCCCGGCATCCCCTCGGCACAGCGAT TCTCGGCACCGAAGAGAGCGTCGAAAGGCTCACCGGCAAAGAGATCAGAGACTTCATGCGCCGCCACTACGTGCCATCGA AAATGCTCGTCACCGCCATCGGCAACATCGAGCACGATGCAGTGACCGGGCTGGCGGAATCGTTTTGGGGCCACCTGAAG GACTCGCCGCAGGAAGATTCGGTGAGGCGGCTGTTCGATCTATCGGCGTACAGGCCATTTACAAAAACGCTGAAAAAAAG TGTCTTCCAGTCGCAGATTCTGCTCGGCACGATCTTCCCGCGAGACGACCGTCGCTTCTGGGGACTGATGGTGCTGAACG CCATGCTGTCGAGCGGCATGAGTTCGATCCTGAACCTCGAACTGCGCGAGAAGCGCGGACTGGTCTATCAGGCGTACTCT TCGGTCTCTTTCTACGACGAGGTCACTGAATTCAATGTTTATGCGGGCACCGACAAGGGCAAAACCTCGAAAACCCTCGA CACGATCGCCGAACTCCTGACCGGCAACGTGCTGAAGGAACCCGATCCCTTCGAACTCGCGGCAGCCAAATCGAAGATGC TCGGTTCGATGATCCTCGGCATGGAAAAGATGACCCGGCGCATGTCGCACATAGCGCAGGATATGTTCTATTTCGGGCGA TACCTTTCACCTTCTGAAAAGGCTGGAATGATTGATGGGGTGACGGCTGAAGATGTGGCGGTGGCTGCCGCCGCACTCGG CATCCCCGAGCAAATATCGACTCTGGTCTACAAGCCCGGCGGCAGGTAA
Upstream 100 bases:
>100_bases TGTGGCGGCACGGGAGATACCGCGGAACCGGCTGGAGCGCAATCCATGCAGATGCGGCCCAGAGCCAATTTGTGCTTAAT AATAAGAAGAATAACTTACA
Downstream 100 bases:
>100_bases CTTTCGGCACTTGACGACGAAGTGTGGCCACGTTGAACGAAGTACGGAAAAACCCGTTGAACGATCCGTTTTAAAAAAGC CTGAAAAAATAGTATAATTC
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MHPNPSAIVRKNIVSPSIGNATHPAERLSTGIVESGTLPNGLRIVSNQVPWIHSVTLGLWINAGSREDPEGFEGMAHFIE HALFKGTQKRDYVEIARCVEETGGYIDAWTTKEQTCLCVRCLREHLHLAFDLLADLCCNPVFPPDEIEKEKEVVLEEIAS VNDTPEELIFEDFDRRAFSRHPLGTAILGTEESVERLTGKEIRDFMRRHYVPSKMLVTAIGNIEHDAVTGLAESFWGHLK DSPQEDSVRRLFDLSAYRPFTKTLKKSVFQSQILLGTIFPRDDRRFWGLMVLNAMLSSGMSSILNLELREKRGLVYQAYS SVSFYDEVTEFNVYAGTDKGKTSKTLDTIAELLTGNVLKEPDPFELAAAKSKMLGSMILGMEKMTRRMSHIAQDMFYFGR YLSPSEKAGMIDGVTAEDVAVAAAALGIPEQISTLVYKPGGR
Sequences:
>Translated_442_residues MHPNPSAIVRKNIVSPSIGNATHPAERLSTGIVESGTLPNGLRIVSNQVPWIHSVTLGLWINAGSREDPEGFEGMAHFIE HALFKGTQKRDYVEIARCVEETGGYIDAWTTKEQTCLCVRCLREHLHLAFDLLADLCCNPVFPPDEIEKEKEVVLEEIAS VNDTPEELIFEDFDRRAFSRHPLGTAILGTEESVERLTGKEIRDFMRRHYVPSKMLVTAIGNIEHDAVTGLAESFWGHLK DSPQEDSVRRLFDLSAYRPFTKTLKKSVFQSQILLGTIFPRDDRRFWGLMVLNAMLSSGMSSILNLELREKRGLVYQAYS SVSFYDEVTEFNVYAGTDKGKTSKTLDTIAELLTGNVLKEPDPFELAAAKSKMLGSMILGMEKMTRRMSHIAQDMFYFGR YLSPSEKAGMIDGVTAEDVAVAAAALGIPEQISTLVYKPGGR >Mature_442_residues MHPNPSAIVRKNIVSPSIGNATHPAERLSTGIVESGTLPNGLRIVSNQVPWIHSVTLGLWINAGSREDPEGFEGMAHFIE HALFKGTQKRDYVEIARCVEETGGYIDAWTTKEQTCLCVRCLREHLHLAFDLLADLCCNPVFPPDEIEKEKEVVLEEIAS VNDTPEELIFEDFDRRAFSRHPLGTAILGTEESVERLTGKEIRDFMRRHYVPSKMLVTAIGNIEHDAVTGLAESFWGHLK DSPQEDSVRRLFDLSAYRPFTKTLKKSVFQSQILLGTIFPRDDRRFWGLMVLNAMLSSGMSSILNLELREKRGLVYQAYS SVSFYDEVTEFNVYAGTDKGKTSKTLDTIAELLTGNVLKEPDPFELAAAKSKMLGSMILGMEKMTRRMSHIAQDMFYFGR YLSPSEKAGMIDGVTAEDVAVAAAALGIPEQISTLVYKPGGR
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=399, Percent_Identity=25.5639097744361, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI46593007, Length=214, Percent_Identity=32.2429906542056, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI24308013, Length=428, Percent_Identity=24.0654205607477, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI50592988, Length=200, Percent_Identity=25, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71999683, Length=419, Percent_Identity=25.0596658711217, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553678, Length=398, Percent_Identity=24.3718592964824, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17510601, Length=417, Percent_Identity=21.1031175059952, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323192, Length=409, Percent_Identity=25.1833740831296, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321813, Length=422, Percent_Identity=19.6682464454976, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323421, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357875, Length=205, Percent_Identity=35.609756097561, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24646943, Length=205, Percent_Identity=35.609756097561, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI19921772, Length=452, Percent_Identity=21.6814159292035, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24667786, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 49355; Mature: 49355
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPNPSAIVRKNIVSPSIGNATHPAERLSTGIVESGTLPNGLRIVSNQVPWIHSVTLGLW CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCHHEEEEEEE INAGSREDPEGFEGMAHFIEHALFKGTQKRDYVEIARCVEETGGYIDAWTTKEQTCLCVR EECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH CLREHLHLAFDLLADLCCNPVFPPDEIEKEKEVVLEEIASVNDTPEELIFEDFDRRAFSR HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC HPLGTAILGTEESVERLTGKEIRDFMRRHYVPSKMLVTAIGNIEHDAVTGLAESFWGHLK CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC DSPQEDSVRRLFDLSAYRPFTKTLKKSVFQSQILLGTIFPRDDRRFWGLMVLNAMLSSGM CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SSILNLELREKRGLVYQAYSSVSFYDEVTEFNVYAGTDKGKTSKTLDTIAELLTGNVLKE HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCCCC PDPFELAAAKSKMLGSMILGMEKMTRRMSHIAQDMFYFGRYLSPSEKAGMIDGVTAEDVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VAAAALGIPEQISTLVYKPGGR HHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure MHPNPSAIVRKNIVSPSIGNATHPAERLSTGIVESGTLPNGLRIVSNQVPWIHSVTLGLW CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCHHEEEEEEE INAGSREDPEGFEGMAHFIEHALFKGTQKRDYVEIARCVEETGGYIDAWTTKEQTCLCVR EECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH CLREHLHLAFDLLADLCCNPVFPPDEIEKEKEVVLEEIASVNDTPEELIFEDFDRRAFSR HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC HPLGTAILGTEESVERLTGKEIRDFMRRHYVPSKMLVTAIGNIEHDAVTGLAESFWGHLK CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC DSPQEDSVRRLFDLSAYRPFTKTLKKSVFQSQILLGTIFPRDDRRFWGLMVLNAMLSSGM CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SSILNLELREKRGLVYQAYSSVSFYDEVTEFNVYAGTDKGKTSKTLDTIAELLTGNVLKE HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCCCC PDPFELAAAKSKMLGSMILGMEKMTRRMSHIAQDMFYFGRYLSPSEKAGMIDGVTAEDVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH VAAAALGIPEQISTLVYKPGGR HHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]