| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674726
Identifier: 21674726
GI number: 21674726
Start: 1809346
End: 1810713
Strand: Reverse
Name: 21674726
Synonym: CT1914
Alternate gene names: NA
Gene position: 1810713-1809346 (Counterclockwise)
Preceding gene: 21674727
Following gene: 21674725
Centisome position: 84.03
GC content: 36.4
Gene sequence:
>1368_bases ATGAGTTTTGAAGGAGAATTTGCCAGTTACGAGCCTTTAAGACGGTTACTTGATAGTGAAAAAGTTAAATCACTTCAAAA CCGACTTAAAATAAGGCAACAGGAAGAAGAAACAGAAGACTTTGAAGGTTCAATAGTCAAAAAATCTGATTTGACCGAAA GTACCTTACAACCTGATTTAGTTCTTGCAATTGATGGAAGCAATTTAGCTGCTAAAGCAGAAAACGGATTTCCTGGTGCT GAATTTGGTTACATTACCATTGCTTCCGTATTAATTGACTTGAAATTAATTGGAGAGTTAGAAAAAAAGGAATTTGTTGA ACCAAAGAAATTTCGTGAAACCGAAAAAGCATCAACCATTGAAAGCGTTTTTCCCGGTTGTAATGTAATTCTCGATACAG AAAAAAATGCTAAGTCTTCCTTACGGAGAGCTTTATTTGAAGAGTTACGCAGCAACACCATTTTTTCAGATGGAGAAAGT TTGCTTGATACCTACGAGCATCTTTTTAGAATAAAACGTGAACATTTTCAAGAAAGAAATTTACCAAGAAGCCCAATTGA GGGAGTTGAAGAAGAAATGACTTATGACTTTGGGGAATATACTTGTCCTCATTCAGGCGAGCCGCTTTTCTCAACTGATG CTTTGCGTTTACACGAACTTATGAACCCAGGCGGGAGCAATGGTGAAATGTTTGGGCAAATAATGTCCACTCTTGAAAAA CTTTGGCTTGTTCACATTCTAAGAGCATTTGAACGCAAAGGTTGGTTAGCAACACTTCGCAGAGTTGCTTTTATAATGGA TGGACCTTTAGCCGTATTTAGCACTTCATCTTGGTTAACAAAAGTTATAAGTCACGAATTAACTCGGCTGAATGACCTTC AACGGAAAATAAATGGTCAAGACCTTTTAATCATTGGAATTGAAAAATCAGGAACATTCTTCAATCACTTCATTGAGATA GACACTACCAAAGATGGCGTAACTGATAAATTTCCAAAACAATCTGCCTTACTCTTAAATGACGGCTACATAAAACGAAA TATCATTTTTTCTGAGAGTATCAAACCTTACGGTCAAGACACTTATTTTGGAAGAAAACTTTTCTACAAAGCGGCATCAG GTCAAAAAATTGTTCCTGTCGTAGCTTGTTTCAACGAGTATCAAAGAAATCTTAATACAGCAAATCCTGACCAATTTACA AGATTAGCAGATGTTATGAATTTGCTAGACCTACTTGTTTCAAGCAGATACCCGAATTCTGTTTCTCCGTTAGTTTCAGC ACACGCAGAAGCAGCAATTCCTTTGAACTTAGGCAAGCGAATTTTTGAAGACATTGCAAGAGAAATAAGAGAGAAATCAA AAGAATGA
Upstream 100 bases:
>100_bases GACGAGCCCAAGATAAAGGGTTTTTAAGAGTAAAGACTTTAAGTAACCTATTTGTCATTCCAGTTCAAGTGGACAGGTTT GAAGTTTAACACACTATCAT
Downstream 100 bases:
>100_bases TAGCAAAGGAAAAAATATTGAAAGGTTTTGAAACTGCCGAAGCACGTTGGGCAAGGTTTGGACCATACTATGCAATGTTT CCTTTAGAATTTGCATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSFEGEFASYEPLRRLLDSEKVKSLQNRLKIRQQEEETEDFEGSIVKKSDLTESTLQPDLVLAIDGSNLAAKAENGFPGA EFGYITIASVLIDLKLIGELEKKEFVEPKKFRETEKASTIESVFPGCNVILDTEKNAKSSLRRALFEELRSNTIFSDGES LLDTYEHLFRIKREHFQERNLPRSPIEGVEEEMTYDFGEYTCPHSGEPLFSTDALRLHELMNPGGSNGEMFGQIMSTLEK LWLVHILRAFERKGWLATLRRVAFIMDGPLAVFSTSSWLTKVISHELTRLNDLQRKINGQDLLIIGIEKSGTFFNHFIEI DTTKDGVTDKFPKQSALLLNDGYIKRNIIFSESIKPYGQDTYFGRKLFYKAASGQKIVPVVACFNEYQRNLNTANPDQFT RLADVMNLLDLLVSSRYPNSVSPLVSAHAEAAIPLNLGKRIFEDIAREIREKSKE
Sequences:
>Translated_455_residues MSFEGEFASYEPLRRLLDSEKVKSLQNRLKIRQQEEETEDFEGSIVKKSDLTESTLQPDLVLAIDGSNLAAKAENGFPGA EFGYITIASVLIDLKLIGELEKKEFVEPKKFRETEKASTIESVFPGCNVILDTEKNAKSSLRRALFEELRSNTIFSDGES LLDTYEHLFRIKREHFQERNLPRSPIEGVEEEMTYDFGEYTCPHSGEPLFSTDALRLHELMNPGGSNGEMFGQIMSTLEK LWLVHILRAFERKGWLATLRRVAFIMDGPLAVFSTSSWLTKVISHELTRLNDLQRKINGQDLLIIGIEKSGTFFNHFIEI DTTKDGVTDKFPKQSALLLNDGYIKRNIIFSESIKPYGQDTYFGRKLFYKAASGQKIVPVVACFNEYQRNLNTANPDQFT RLADVMNLLDLLVSSRYPNSVSPLVSAHAEAAIPLNLGKRIFEDIAREIREKSKE >Mature_454_residues SFEGEFASYEPLRRLLDSEKVKSLQNRLKIRQQEEETEDFEGSIVKKSDLTESTLQPDLVLAIDGSNLAAKAENGFPGAE FGYITIASVLIDLKLIGELEKKEFVEPKKFRETEKASTIESVFPGCNVILDTEKNAKSSLRRALFEELRSNTIFSDGESL LDTYEHLFRIKREHFQERNLPRSPIEGVEEEMTYDFGEYTCPHSGEPLFSTDALRLHELMNPGGSNGEMFGQIMSTLEKL WLVHILRAFERKGWLATLRRVAFIMDGPLAVFSTSSWLTKVISHELTRLNDLQRKINGQDLLIIGIEKSGTFFNHFIEID TTKDGVTDKFPKQSALLLNDGYIKRNIIFSESIKPYGQDTYFGRKLFYKAASGQKIVPVVACFNEYQRNLNTANPDQFTR LADVMNLLDLLVSSRYPNSVSPLVSAHAEAAIPLNLGKRIFEDIAREIREKSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51729; Mature: 51598
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEGEFASYEPLRRLLDSEKVKSLQNRLKIRQQEEETEDFEGSIVKKSDLTESTLQPDL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCE VLAIDGSNLAAKAENGFPGAEFGYITIASVLIDLKLIGELEKKEFVEPKKFRETEKASTI EEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ESVFPGCNVILDTEKNAKSSLRRALFEELRSNTIFSDGESLLDTYEHLFRIKREHFQERN HHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPRSPIEGVEEEMTYDFGEYTCPHSGEPLFSTDALRLHELMNPGGSNGEMFGQIMSTLEK CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LWLVHILRAFERKGWLATLRRVAFIMDGPLAVFSTSSWLTKVISHELTRLNDLQRKINGQ HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC DLLIIGIEKSGTFFNHFIEIDTTKDGVTDKFPKQSALLLNDGYIKRNIIFSESIKPYGQD EEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCC TYFGRKLFYKAASGQKIVPVVACFNEYQRNLNTANPDQFTRLADVMNLLDLLVSSRYPNS CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC VSPLVSAHAEAAIPLNLGKRIFEDIAREIREKSKE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFEGEFASYEPLRRLLDSEKVKSLQNRLKIRQQEEETEDFEGSIVKKSDLTESTLQPDL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCE VLAIDGSNLAAKAENGFPGAEFGYITIASVLIDLKLIGELEKKEFVEPKKFRETEKASTI EEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ESVFPGCNVILDTEKNAKSSLRRALFEELRSNTIFSDGESLLDTYEHLFRIKREHFQERN HHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LPRSPIEGVEEEMTYDFGEYTCPHSGEPLFSTDALRLHELMNPGGSNGEMFGQIMSTLEK CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LWLVHILRAFERKGWLATLRRVAFIMDGPLAVFSTSSWLTKVISHELTRLNDLQRKINGQ HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC DLLIIGIEKSGTFFNHFIEIDTTKDGVTDKFPKQSALLLNDGYIKRNIIFSESIKPYGQD EEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCC TYFGRKLFYKAASGQKIVPVVACFNEYQRNLNTANPDQFTRLADVMNLLDLLVSSRYPNS CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC VSPLVSAHAEAAIPLNLGKRIFEDIAREIREKSKE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA