| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674725
Identifier: 21674725
GI number: 21674725
Start: 1808222
End: 1809349
Strand: Reverse
Name: 21674725
Synonym: CT1913
Alternate gene names: NA
Gene position: 1809349-1808222 (Counterclockwise)
Preceding gene: 21674726
Following gene: 21674722
Centisome position: 83.96
GC content: 36.61
Gene sequence:
>1128_bases ATGATAGCAAAGGAAAAAATATTGAAAGGTTTTGAAACTGCCGAAGCACGTTGGGCAAGGTTTGGACCATACTATGCAAT GTTTCCTTTAGAATTTGCATTTGATGTAGTTGAGAAATACTCAAAGAACGGTGATTATATAATTGACCCTTTTGCGGGTA GATGCAGTAGTATATATGCTGGTGGCGTTTTAGGAAGAAATAGTTTAGGATTAGAAATTAACCCTGTTGGTTGGTTGTAT GGAACTGTAAAACTGCATCCAGCAGAAAAAGAAGAAGTCATTGACCGACTACTTGAAATTTACAGTAAGAGAAACTATTA TAACCGAGCAATCCAAAAAATGCCCGAATTTTATCGCATTTGTTACTGTGACGAAGTTCTTAAATTCCTGTTAGCCGCCC GAACTCATTTAGATTGGAGAAACAATAAAGTTGATGCGACTTTGATGTCAATACTTCTGATTTACCTACACGCAAAAATT GGCGAAGGACTTTCCAATCAAATGAGAATGACTAAATCAATGGGGATGAATTACTCTGTGCAATGGTGGAAGAAAAACAA TATGACCACACCGCCTGAAATAAACCCCTGCGATTTCATTCTCAAAAAAATCGAATGGCGTTACGAGAAAGGTAAACCAA AAGTTTCTGAGAGTGCCGTTGTGTTCGGTGATAGTTCAAATAAATTAATAAGCATTGCAGAAAGAGCAATAAACAATGAT ATAAAATTTTCTTTGCTGTTTACTTCACCACCCTATTACTCGATTACTGACTATCACGCGGACCAGTGGTTGCGACTGTG GCTTTTAGGTGGTTCAGAAAATCCTCAATCACTAAAAGATAAGCATAAAGGGCGATTTGTAAATAAACAAGAATATTATG ACTTACTGGACAACGTTTTTGGACTTTGTGCCAAAATGATGAAAAGAGAAAGCACTGTTTATGTTCGGACAGACAAGAGA GAATTTACTTTCAACTCTACACTTGAAATACTGAAAAGGCATTTCCCAAATCATTCAGTTAAGATTGTCGAAAAACCTTT GACAAAGGACACAAAAACTCAAACAAAACTCTTCGGGGACAAGACAATGAAGCCAGGAGAAGTTGATATAATAATGTCGA GAAAATGA
Upstream 100 bases:
>100_bases CTCCGTTAGTTTCAGCACACGCAGAAGCAGCAATTCCTTTGAACTTAGGCAAGCGAATTTTTGAAGACATTGCAAGAGAA ATAAGAGAGAAATCAAAAGA
Downstream 100 bases:
>100_bases GCCAACTCAACAGCCACACACATTGCCAAGTCGCACAAGCCAACCCACAAGCCAAAACTTGGCAAAGAGTGTGTCTGTTC CTGCGCACAACTGGCAGACA
Product: DNA methylase, putative
Products: NA
Alternate protein names: DNA Methylase; DNA Methylase N-4/N-6 Domain Protein; DNA Methylase N-4/N-6 Domain-Containing Protein; Site-Specific DNA-Methyltransferase; Type II R/M System
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MIAKEKILKGFETAEARWARFGPYYAMFPLEFAFDVVEKYSKNGDYIIDPFAGRCSSIYAGGVLGRNSLGLEINPVGWLY GTVKLHPAEKEEVIDRLLEIYSKRNYYNRAIQKMPEFYRICYCDEVLKFLLAARTHLDWRNNKVDATLMSILLIYLHAKI GEGLSNQMRMTKSMGMNYSVQWWKKNNMTTPPEINPCDFILKKIEWRYEKGKPKVSESAVVFGDSSNKLISIAERAINND IKFSLLFTSPPYYSITDYHADQWLRLWLLGGSENPQSLKDKHKGRFVNKQEYYDLLDNVFGLCAKMMKRESTVYVRTDKR EFTFNSTLEILKRHFPNHSVKIVEKPLTKDTKTQTKLFGDKTMKPGEVDIIMSRK
Sequences:
>Translated_375_residues MIAKEKILKGFETAEARWARFGPYYAMFPLEFAFDVVEKYSKNGDYIIDPFAGRCSSIYAGGVLGRNSLGLEINPVGWLY GTVKLHPAEKEEVIDRLLEIYSKRNYYNRAIQKMPEFYRICYCDEVLKFLLAARTHLDWRNNKVDATLMSILLIYLHAKI GEGLSNQMRMTKSMGMNYSVQWWKKNNMTTPPEINPCDFILKKIEWRYEKGKPKVSESAVVFGDSSNKLISIAERAINND IKFSLLFTSPPYYSITDYHADQWLRLWLLGGSENPQSLKDKHKGRFVNKQEYYDLLDNVFGLCAKMMKRESTVYVRTDKR EFTFNSTLEILKRHFPNHSVKIVEKPLTKDTKTQTKLFGDKTMKPGEVDIIMSRK >Mature_375_residues MIAKEKILKGFETAEARWARFGPYYAMFPLEFAFDVVEKYSKNGDYIIDPFAGRCSSIYAGGVLGRNSLGLEINPVGWLY GTVKLHPAEKEEVIDRLLEIYSKRNYYNRAIQKMPEFYRICYCDEVLKFLLAARTHLDWRNNKVDATLMSILLIYLHAKI GEGLSNQMRMTKSMGMNYSVQWWKKNNMTTPPEINPCDFILKKIEWRYEKGKPKVSESAVVFGDSSNKLISIAERAINND IKFSLLFTSPPYYSITDYHADQWLRLWLLGGSENPQSLKDKHKGRFVNKQEYYDLLDNVFGLCAKMMKRESTVYVRTDKR EFTFNSTLEILKRHFPNHSVKIVEKPLTKDTKTQTKLFGDKTMKPGEVDIIMSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43675; Mature: 43675
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKEKILKGFETAEARWARFGPYYAMFPLEFAFDVVEKYSKNGDYIIDPFAGRCSSIYA CCCHHHHHHCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHC GGVLGRNSLGLEINPVGWLYGTVKLHPAEKEEVIDRLLEIYSKRNYYNRAIQKMPEFYRI CCCCCCCCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH CYCDEVLKFLLAARTHLDWRNNKVDATLMSILLIYLHAKIGEGLSNQMRMTKSMGMNYSV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE QWWKKNNMTTPPEINPCDFILKKIEWRYEKGKPKVSESAVVFGDSSNKLISIAERAINND EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCC IKFSLLFTSPPYYSITDYHADQWLRLWLLGGSENPQSLKDKHKGRFVNKQEYYDLLDNVF EEEEEEEECCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH GLCAKMMKRESTVYVRTDKREFTFNSTLEILKRHFPNHSVKIVEKPLTKDTKTQTKLFGD HHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCC KTMKPGEVDIIMSRK CCCCCCCEEEEEECC >Mature Secondary Structure MIAKEKILKGFETAEARWARFGPYYAMFPLEFAFDVVEKYSKNGDYIIDPFAGRCSSIYA CCCHHHHHHCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHC GGVLGRNSLGLEINPVGWLYGTVKLHPAEKEEVIDRLLEIYSKRNYYNRAIQKMPEFYRI CCCCCCCCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH CYCDEVLKFLLAARTHLDWRNNKVDATLMSILLIYLHAKIGEGLSNQMRMTKSMGMNYSV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE QWWKKNNMTTPPEINPCDFILKKIEWRYEKGKPKVSESAVVFGDSSNKLISIAERAINND EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCC IKFSLLFTSPPYYSITDYHADQWLRLWLLGGSENPQSLKDKHKGRFVNKQEYYDLLDNVF EEEEEEEECCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH GLCAKMMKRESTVYVRTDKREFTFNSTLEILKRHFPNHSVKIVEKPLTKDTKTQTKLFGD HHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCC KTMKPGEVDIIMSRK CCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA