| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674712
Identifier: 21674712
GI number: 21674712
Start: 1798869
End: 1800014
Strand: Direct
Name: 21674712
Synonym: CT1900
Alternate gene names: NA
Gene position: 1798869-1800014 (Clockwise)
Preceding gene: 21674706
Following gene: 21674713
Centisome position: 83.48
GC content: 54.62
Gene sequence:
>1146_bases ATGAAAAAGATTTTGCTCTCTCTGGCGCTTCTTTCAGCGGCCATGCTTTCAACGCGGCCATCGTTCGCTTTCGGGCATGA ACTTCTGGATGAACCTCTGGCAATAATTGCCGACCAGCAGGCAAGTCTGGAGCAGACCGCAAAAAACAGCACTTACGAAC TCCTGGTGGCCAAAAGGAGCATCACTCTGAAAAACGGAGTCTTCAAGGCTGGCGACAATCCGGACAATTTCATCGAGGCC AGACTGGTGCGTTCTGTGATCTGCGACCTGAACAAAGACAACAAACCCGACATCGCGGTCATCATCGAGCACCACGGTAT GGGCAGCGCCGGATTTTTCGAACTGTCCGCCCTGCTTTCCGGAGCAAAGGGTTTCACGCAGACCAGGCCGGTGCTGCTTG GTGAAAACATCGAAATCAAAGAGTTCAGCGTTTCCTCAAACATGTGGCGACCGGAAGAGCTGGACATTGTGTATCTCGGT CACCAGGAGTCCGACTCCCACGCAAACCCGACCGAACAGAAACGCGCACGCTATTTCCTCGACGACGACGGCCAGCTCAG CAACGATTTTTCGCACATCCAGATCGTCAAAAAACCGGCGCTCTATCTCTATCCCGTCAGAACCACAAAGATCGAGGTGC GCCTGTCGCCGAAAGGCAAAGTCATCCGGACGATTCCCGACTACAATAACCGCTGGCGCGTTACGGTACAGAAGGACGGA ATGATCGATGGCCAGTACCATTATCTCTTCTACGAAGCCGCGCTCGACAAAAAGATCGAATTGCCCCGCCGCGGCTGGTC GGTCCGGTATGGTGATCTCGCCGGCTGGTTCGACAGCCATCTGCATGAGATGGGGCTCAACCGGGCGGAAGCTGAAGACC TGAAAGAGTACTGGCTCAAGAACCTTCCGGATAGCCCGTATTACACCATCAGGCTGATTGAGCCTGATGTCGTGAACAAG CGTCTCGGCCTGAAGATACACCCGAAACCGGACAGCGAGCTCAGGGTGCTGCTCAATTTCACCCCAACCGAAAAACCCGA GAAAATCAAGGCGCCAAAGCTCACCAGCTTCCGGAGAAAAGGGTTCACTGCGGTCGAATGGGGCGGCATCCTCGATGATG GCCGCATGGCTGAGAACGTTCACTGA
Upstream 100 bases:
>100_bases GCACCCTCTTCGGCCCGGGTTCATTTTTCGTTGTAAACTGGCGTTTCCGGTGCTTACATTTCAAGGCAAGCATCACCATC AGTAACACAAGCGGAAGCAC
Downstream 100 bases:
>100_bases CCGGTAATTTCCCGGACTCTGAGCTTGCGGCGACGGGTTCGGGGATGTTTCAGCGTCATGACAGCAGAAGGATCGCTCTC TCTATTAAAAAAAGAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKKILLSLALLSAAMLSTRPSFAFGHELLDEPLAIIADQQASLEQTAKNSTYELLVAKRSITLKNGVFKAGDNPDNFIEA RLVRSVICDLNKDNKPDIAVIIEHHGMGSAGFFELSALLSGAKGFTQTRPVLLGENIEIKEFSVSSNMWRPEELDIVYLG HQESDSHANPTEQKRARYFLDDDGQLSNDFSHIQIVKKPALYLYPVRTTKIEVRLSPKGKVIRTIPDYNNRWRVTVQKDG MIDGQYHYLFYEAALDKKIELPRRGWSVRYGDLAGWFDSHLHEMGLNRAEAEDLKEYWLKNLPDSPYYTIRLIEPDVVNK RLGLKIHPKPDSELRVLLNFTPTEKPEKIKAPKLTSFRRKGFTAVEWGGILDDGRMAENVH
Sequences:
>Translated_381_residues MKKILLSLALLSAAMLSTRPSFAFGHELLDEPLAIIADQQASLEQTAKNSTYELLVAKRSITLKNGVFKAGDNPDNFIEA RLVRSVICDLNKDNKPDIAVIIEHHGMGSAGFFELSALLSGAKGFTQTRPVLLGENIEIKEFSVSSNMWRPEELDIVYLG HQESDSHANPTEQKRARYFLDDDGQLSNDFSHIQIVKKPALYLYPVRTTKIEVRLSPKGKVIRTIPDYNNRWRVTVQKDG MIDGQYHYLFYEAALDKKIELPRRGWSVRYGDLAGWFDSHLHEMGLNRAEAEDLKEYWLKNLPDSPYYTIRLIEPDVVNK RLGLKIHPKPDSELRVLLNFTPTEKPEKIKAPKLTSFRRKGFTAVEWGGILDDGRMAENVH >Mature_381_residues MKKILLSLALLSAAMLSTRPSFAFGHELLDEPLAIIADQQASLEQTAKNSTYELLVAKRSITLKNGVFKAGDNPDNFIEA RLVRSVICDLNKDNKPDIAVIIEHHGMGSAGFFELSALLSGAKGFTQTRPVLLGENIEIKEFSVSSNMWRPEELDIVYLG HQESDSHANPTEQKRARYFLDDDGQLSNDFSHIQIVKKPALYLYPVRTTKIEVRLSPKGKVIRTIPDYNNRWRVTVQKDG MIDGQYHYLFYEAALDKKIELPRRGWSVRYGDLAGWFDSHLHEMGLNRAEAEDLKEYWLKNLPDSPYYTIRLIEPDVVNK RLGLKIHPKPDSELRVLLNFTPTEKPEKIKAPKLTSFRRKGFTAVEWGGILDDGRMAENVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43376; Mature: 43376
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLSLALLSAAMLSTRPSFAFGHELLDEPLAIIADQQASLEQTAKNSTYELLVAKRS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEEEEE ITLKNGVFKAGDNPDNFIEARLVRSVICDLNKDNKPDIAVIIEHHGMGSAGFFELSALLS EEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH GAKGFTQTRPVLLGENIEIKEFSVSSNMWRPEELDIVYLGHQESDSHANPTEQKRARYFL CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCEEEE DDDGQLSNDFSHIQIVKKPALYLYPVRTTKIEVRLSPKGKVIRTIPDYNNRWRVTVQKDG CCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCEEEECCCCCCEEEEEEECCC MIDGQYHYLFYEAALDKKIELPRRGWSVRYGDLAGWFDSHLHEMGLNRAEAEDLKEYWLK CCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHH NLPDSPYYTIRLIEPDVVNKRLGLKIHPKPDSELRVLLNFTPTEKPEKIKAPKLTSFRRK CCCCCCCEEEEEECCHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GFTAVEWGGILDDGRMAENVH CCEEEECCCCCCCCCHHCCCC >Mature Secondary Structure MKKILLSLALLSAAMLSTRPSFAFGHELLDEPLAIIADQQASLEQTAKNSTYELLVAKRS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEEEEE ITLKNGVFKAGDNPDNFIEARLVRSVICDLNKDNKPDIAVIIEHHGMGSAGFFELSALLS EEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH GAKGFTQTRPVLLGENIEIKEFSVSSNMWRPEELDIVYLGHQESDSHANPTEQKRARYFL CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCEEEE DDDGQLSNDFSHIQIVKKPALYLYPVRTTKIEVRLSPKGKVIRTIPDYNNRWRVTVQKDG CCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCEEEECCCCCCEEEEEEECCC MIDGQYHYLFYEAALDKKIELPRRGWSVRYGDLAGWFDSHLHEMGLNRAEAEDLKEYWLK CCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHH NLPDSPYYTIRLIEPDVVNKRLGLKIHPKPDSELRVLLNFTPTEKPEKIKAPKLTSFRRK CCCCCCCEEEEEECCHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GFTAVEWGGILDDGRMAENVH CCEEEECCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA