| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674643
Identifier: 21674643
GI number: 21674643
Start: 1734429
End: 1735226
Strand: Reverse
Name: 21674643
Synonym: CT1829
Alternate gene names: NA
Gene position: 1735226-1734429 (Counterclockwise)
Preceding gene: 21674644
Following gene: 21674641
Centisome position: 80.52
GC content: 54.01
Gene sequence:
>798_bases TTGACGAGTCGTATGATTAAAAAGATAAAAGCTTTTTTTGCCGGTGCGGGCATTGGAGCCCTTGGAGGTTTGATTGGTCT TGGCGGAGCGGAATTTCGTTTGCCGCTTTTACTTGGCATGTTTGCTTTTCCTCCGCTGGAAGCCGTCATCCTCAACAAGG CAATGAGTCTTCTGGTGGTTGCCTCGGCCCTGCCGTTCAGGGCCGCTACCATCTCCTGGGAGACTCTGTTCGCGCACTGG ACGATCGTTGTCAATCTTCTCGCTGGCAGTTTGGCCGGGGCCTGGGCGGGTGCCAGCTGGGCGACAAAATTGCGAAGTGA AACGCTCTACCGGGTTATAGCAATACTGCTGCTCGGCATTGCGCTTGTGTTGCTGACCGGACACCAGACAACCACAACCG GAACACCTTTGTTTGATTCGCCAGCCCTGCTGATGACAACAGGTGTTATTGCGGGCCTGGGCATCGGCATCGTTGCAGCT CTTCTTGGCGTGGCCGGTGGTGAGCTGCTTATACCTGTCATCGTTTTCCTGTTCGGGGCGGACATCAAACTTGCGGGAAG TTTGTCGCTCGCCGTCAGCCTGCCAACCATGCTGGTCAGCTTTGCGCGTTACAGCAAGGATAGCAGCTTTGTGGTTCTTG GTGCGAACAAATCATTTGTCCTGATTATGGCTATCGGCTCGATTGCTGGTGCCTGGCTCGGCTCTCGGTTGCTCGGCATT GTCCCCGACAGTTATCTGCTGCCGATGCTTGCCGCAATTTTGTTGATTTCAGCGCTTAAAGTGTGGAAGCACAAATAA
Upstream 100 bases:
>100_bases GGATACGCCGGGCGTGAACACCGAGGAGGAGCTGGAAGAGGTGCGCAGGCTGTTCAGGGAGCGGTTTGGAGCGTGAATTG GTGAAACATCGTAACCTGCT
Downstream 100 bases:
>100_bases CTCCCTGCAAAGCGTAGCCGGCAATTTTTACTCCGTCACCCTAGCTTCTCTTTGCCCGTCGTGGAAGGTGAGACCTATCT TCGCGTCAGCTTCGAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTSRMIKKIKAFFAGAGIGALGGLIGLGGAEFRLPLLLGMFAFPPLEAVILNKAMSLLVVASALPFRAATISWETLFAHW TIVVNLLAGSLAGAWAGASWATKLRSETLYRVIAILLLGIALVLLTGHQTTTTGTPLFDSPALLMTTGVIAGLGIGIVAA LLGVAGGELLIPVIVFLFGADIKLAGSLSLAVSLPTMLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGI VPDSYLLPMLAAILLISALKVWKHK
Sequences:
>Translated_265_residues MTSRMIKKIKAFFAGAGIGALGGLIGLGGAEFRLPLLLGMFAFPPLEAVILNKAMSLLVVASALPFRAATISWETLFAHW TIVVNLLAGSLAGAWAGASWATKLRSETLYRVIAILLLGIALVLLTGHQTTTTGTPLFDSPALLMTTGVIAGLGIGIVAA LLGVAGGELLIPVIVFLFGADIKLAGSLSLAVSLPTMLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGI VPDSYLLPMLAAILLISALKVWKHK >Mature_264_residues TSRMIKKIKAFFAGAGIGALGGLIGLGGAEFRLPLLLGMFAFPPLEAVILNKAMSLLVVASALPFRAATISWETLFAHWT IVVNLLAGSLAGAWAGASWATKLRSETLYRVIAILLLGIALVLLTGHQTTTTGTPLFDSPALLMTTGVIAGLGIGIVAAL LGVAGGELLIPVIVFLFGADIKLAGSLSLAVSLPTMLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGIV PDSYLLPMLAAILLISALKVWKHK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27511; Mature: 27379
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRMIKKIKAFFAGAGIGALGGLIGLGGAEFRLPLLLGMFAFPPLEAVILNKAMSLLVV CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASALPFRAATISWETLFAHWTIVVNLLAGSLAGAWAGASWATKLRSETLYRVIAILLLGI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALVLLTGHQTTTTGTPLFDSPALLMTTGVIAGLGIGIVAALLGVAGGELLIPVIVFLFGA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC DIKLAGSLSLAVSLPTMLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGI CEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHH VPDSYLLPMLAAILLISALKVWKHK CCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSRMIKKIKAFFAGAGIGALGGLIGLGGAEFRLPLLLGMFAFPPLEAVILNKAMSLLVV CHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASALPFRAATISWETLFAHWTIVVNLLAGSLAGAWAGASWATKLRSETLYRVIAILLLGI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALVLLTGHQTTTTGTPLFDSPALLMTTGVIAGLGIGIVAALLGVAGGELLIPVIVFLFGA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC DIKLAGSLSLAVSLPTMLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGI CEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHH VPDSYLLPMLAAILLISALKVWKHK CCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA