| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674641
Identifier: 21674641
GI number: 21674641
Start: 1732049
End: 1733212
Strand: Reverse
Name: 21674641
Synonym: CT1827
Alternate gene names: NA
Gene position: 1733212-1732049 (Counterclockwise)
Preceding gene: 21674643
Following gene: 21674640
Centisome position: 80.43
GC content: 62.11
Gene sequence:
>1164_bases TTGATCATACGGTCACGGTTTTTCAGGAACTTACGCTTTTTCAACCTGTTTCCCGCGTCGGGCGGAGGGCCGACCTTTGG TGGGGATGTGTTATATTCGAACTTGACGTTTCACTCATCATCGGAGAATGCAATGGCCGCTCAGACCGCAGCCGACATCC TTGCCAGGCTTCTCGGCATCGGGCCGGATGAGGCGCAGCACCAGCTCGACCGTTTTGCGGGCGGCATGACGGCGGAGCTG CTCGACCGCAAGCGCCTCGCCGTCGGTGGGCTGGGCGTTTTTTCGGTCGTGCACGAACAGGCGACGAGGCAGACGACCGC TTCGGGGACACGCTACCAGCCTCCGAGGGATCGGGTGGCGTTCGAAGCGCGGAAGGAGCTGACGGGCGACGCCGAACGCA TCGCGAGCGTTCGGCTCGGCATGGAGGCGAGCGAGGCGCGGCGGCTGGCCAAGGCGCTCGGCGAGCTGTTCGAGGCGATG AAAAAGGGGACGGGCCGGTTTGAATTGCGCGGATTCGGTTCGTTCACGCTGGTGTCGGGCGCATTGCGCTTCCAGCCGGA AAGCTCGCTCGAAGCGCTGCTCAACATCGGCTACGGCGACCTGAAGGAGGTCGTCATTGCCGACCACTCCGCTGAAAAAG AGACGTTACCGGCTCCGGAGAAGCCGGGAGGATTGAAAAAGGCGGCGCTGTTCGTCGCGGCGGTCTTGATGCTTGCCAGC GGCTGGTTTCTCTACCGGCAGTTCGCGCCGGACGGCGTCGATGCGTTGCCGTCCGCCGGTAGCTCCGCGGAGTCCGGCGT CGCAGCGCCCGTGGCGTCGAGTGCGCTGAGCGCTCCGCTGTCCTCGAAAGCACCGGAAAGCGTTCAGGCATCGCCGGATT CGCTCATCCTTCAGAAGGGGCGATACACAGTGATTGTCGCGACCTTCAATACCCGAAAGGTCGTCCGGCAGGAGATAGCG CGGCTTTCGGAGATGGGTCACCGGGTCTGGTGCTGGCCGGTCACTTCCGGGGGAAGCCGCTATTACCGGCTCGTGATCGG TGATTTTGAGACGCGGAAGGCGGCGCTCGACAGCATGAAGTCGATGCCGAAGGGGCTGTCGAGTCACAGCTATATTCAGC AAGCACCAAAAAATGTTGTTTTGTATGGAGAACAAGGCTTGTAA
Upstream 100 bases:
>100_bases CTTGACGTTCGACAGCTCGCCCTTCACCCGCACGAAGGGGAAGAGGCTCTCCAGCTCGTTCTTGATGGCGCGGGTCAGCT CGCCAACGCTTTGCGCGGTT
Downstream 100 bases:
>100_bases CAAATTGCATCCTCAATCGATGTGCCCCGCGTTCGGCGGTCTGCGCGTGCTCATGCGCATCGACGGCGCACAGGTCTGCA TGGCCGCCGACCAGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation Domain Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL
Sequences:
>Translated_387_residues MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL >Mature_387_residues MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41707; Mature: 41707
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGI CCCHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCC GPDEAQHQLDRFAGGMTAELLDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVA CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH FEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAMKKGTGRFELRGFGSFTLVSG HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC ALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS HHCCCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKG CHHHEECCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECC RYTVIVATFNTRKVVRQEIARLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMK CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHH SMPKGLSSHSYIQQAPKNVVLYGEQGL HHHCCCCCHHHHHHCCCCEEEECCCCC >Mature Secondary Structure MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGI CCCHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCC GPDEAQHQLDRFAGGMTAELLDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVA CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH FEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAMKKGTGRFELRGFGSFTLVSG HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC ALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS HHCCCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKG CHHHEECCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECC RYTVIVATFNTRKVVRQEIARLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMK CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHH SMPKGLSSHSYIQQAPKNVVLYGEQGL HHHCCCCCHHHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA