Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674641

Identifier: 21674641

GI number: 21674641

Start: 1732049

End: 1733212

Strand: Reverse

Name: 21674641

Synonym: CT1827

Alternate gene names: NA

Gene position: 1733212-1732049 (Counterclockwise)

Preceding gene: 21674643

Following gene: 21674640

Centisome position: 80.43

GC content: 62.11

Gene sequence:

>1164_bases
TTGATCATACGGTCACGGTTTTTCAGGAACTTACGCTTTTTCAACCTGTTTCCCGCGTCGGGCGGAGGGCCGACCTTTGG
TGGGGATGTGTTATATTCGAACTTGACGTTTCACTCATCATCGGAGAATGCAATGGCCGCTCAGACCGCAGCCGACATCC
TTGCCAGGCTTCTCGGCATCGGGCCGGATGAGGCGCAGCACCAGCTCGACCGTTTTGCGGGCGGCATGACGGCGGAGCTG
CTCGACCGCAAGCGCCTCGCCGTCGGTGGGCTGGGCGTTTTTTCGGTCGTGCACGAACAGGCGACGAGGCAGACGACCGC
TTCGGGGACACGCTACCAGCCTCCGAGGGATCGGGTGGCGTTCGAAGCGCGGAAGGAGCTGACGGGCGACGCCGAACGCA
TCGCGAGCGTTCGGCTCGGCATGGAGGCGAGCGAGGCGCGGCGGCTGGCCAAGGCGCTCGGCGAGCTGTTCGAGGCGATG
AAAAAGGGGACGGGCCGGTTTGAATTGCGCGGATTCGGTTCGTTCACGCTGGTGTCGGGCGCATTGCGCTTCCAGCCGGA
AAGCTCGCTCGAAGCGCTGCTCAACATCGGCTACGGCGACCTGAAGGAGGTCGTCATTGCCGACCACTCCGCTGAAAAAG
AGACGTTACCGGCTCCGGAGAAGCCGGGAGGATTGAAAAAGGCGGCGCTGTTCGTCGCGGCGGTCTTGATGCTTGCCAGC
GGCTGGTTTCTCTACCGGCAGTTCGCGCCGGACGGCGTCGATGCGTTGCCGTCCGCCGGTAGCTCCGCGGAGTCCGGCGT
CGCAGCGCCCGTGGCGTCGAGTGCGCTGAGCGCTCCGCTGTCCTCGAAAGCACCGGAAAGCGTTCAGGCATCGCCGGATT
CGCTCATCCTTCAGAAGGGGCGATACACAGTGATTGTCGCGACCTTCAATACCCGAAAGGTCGTCCGGCAGGAGATAGCG
CGGCTTTCGGAGATGGGTCACCGGGTCTGGTGCTGGCCGGTCACTTCCGGGGGAAGCCGCTATTACCGGCTCGTGATCGG
TGATTTTGAGACGCGGAAGGCGGCGCTCGACAGCATGAAGTCGATGCCGAAGGGGCTGTCGAGTCACAGCTATATTCAGC
AAGCACCAAAAAATGTTGTTTTGTATGGAGAACAAGGCTTGTAA

Upstream 100 bases:

>100_bases
CTTGACGTTCGACAGCTCGCCCTTCACCCGCACGAAGGGGAAGAGGCTCTCCAGCTCGTTCTTGATGGCGCGGGTCAGCT
CGCCAACGCTTTGCGCGGTT

Downstream 100 bases:

>100_bases
CAAATTGCATCCTCAATCGATGTGCCCCGCGTTCGGCGGTCTGCGCGTGCTCATGCGCATCGACGGCGCACAGGTCTGCA
TGGCCGCCGACCAGGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation Domain Protein

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL
LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM
KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS
GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA
RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL

Sequences:

>Translated_387_residues
MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL
LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM
KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS
GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA
RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL
>Mature_387_residues
MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGIGPDEAQHQLDRFAGGMTAEL
LDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVAFEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAM
KKGTGRFELRGFGSFTLVSGALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS
GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKGRYTVIVATFNTRKVVRQEIA
RLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMKSMPKGLSSHSYIQQAPKNVVLYGEQGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41707; Mature: 41707

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGI
CCCHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
GPDEAQHQLDRFAGGMTAELLDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
FEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAMKKGTGRFELRGFGSFTLVSG
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC
ALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS
HHCCCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKG
CHHHEECCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECC
RYTVIVATFNTRKVVRQEIARLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMK
CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHH
SMPKGLSSHSYIQQAPKNVVLYGEQGL
HHHCCCCCHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MIIRSRFFRNLRFFNLFPASGGGPTFGGDVLYSNLTFHSSSENAMAAQTAADILARLLGI
CCCHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
GPDEAQHQLDRFAGGMTAELLDRKRLAVGGLGVFSVVHEQATRQTTASGTRYQPPRDRVA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
FEARKELTGDAERIASVRLGMEASEARRLAKALGELFEAMKKGTGRFELRGFGSFTLVSG
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC
ALRFQPESSLEALLNIGYGDLKEVVIADHSAEKETLPAPEKPGGLKKAALFVAAVLMLAS
HHCCCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GWFLYRQFAPDGVDALPSAGSSAESGVAAPVASSALSAPLSSKAPESVQASPDSLILQKG
CHHHEECCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECC
RYTVIVATFNTRKVVRQEIARLSEMGHRVWCWPVTSGGSRYYRLVIGDFETRKAALDSMK
CEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHH
SMPKGLSSHSYIQQAPKNVVLYGEQGL
HHHCCCCCHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA