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The map label for this gene is 21674626

Identifier: 21674626

GI number: 21674626

Start: 1716963

End: 1717706

Strand: Direct

Name: 21674626

Synonym: CT1812

Alternate gene names: NA

Gene position: 1716963-1717706 (Clockwise)

Preceding gene: 21674625

Following gene: 21674627

Centisome position: 79.68

GC content: 55.78

Gene sequence:

>744_bases
GTGACGCGGAACGACTCAGGCGATCTCATTTCAAGAAACGACAGCACGAACCACATGAACACCACCCAGCCCCAGAAAAT
GCTTCCGGAAGCCACCTTCTCCGACCGGATGCTTGAAATCGGCATAAAGTATAAAAAGCAGCTCACCGCTCTTGTTGTCG
TCATCTGCCTCGCTGCTGGCGGGACGCTTTTCTGGATGCAGAAAACCAAAGTCGACGAGGTTCAGGCCTCGCTCGCCCTT
GCGAAGATCACTCCGTGGATCGAAATGGGAGACGTCAATAAAGCGGTCAATGGCGAAGGCTCGATAAAAGGGCTGAACAG
TATCATTAAAACATGGGGCGGCACACCAAGCGGAAAAACTGCCAGGCTCTATATGGCCTATATCCTGCTGAACAGTGGAA
AGCCGGACGATGCGCTTTCGATATACAAGGGATTCAGCAGTGATAACAAGGATCTTCAGGCATCGGCGCTCGCCGGAGCC
GCCGCCTGCCATGTCCAGAAAAAGGCCTTCGCCGAAGCTGCGCCGGAGTACGAAAAGGCGTCCGAAACCGCCGAGAACGA
GACGCTCAAATCGATGTACCTCACCAAAGCCGCCGAAAGCTACTCCGCCGCGGGACAGGCCGACAAGGCGGCAAAACTTT
ATGATCAGGTGATCAAAACCTGGCCAGCCACATCGTCAGCGGGAATGGCCCAGCGCGCGCTCTTGCGCCTTGCCGGCGCA
GGCGTGCAGATACCGCAAATCTGA

Upstream 100 bases:

>100_bases
AATGCAAGAACCCTGTTCGGCCTGCCGTAACCGGCGGCTGCCGCTGATTTTGAAATTCATGCGAACTTGCGTAGGTTGAG
CCTCGGACTGACCGCCATCA

Downstream 100 bases:

>100_bases
CCGATTGTTTTTCGACACTCAACCACATTACCATGCCAGAAAAATTCATCATCAAGACCAGCATGGGTGATATTTCCATC
GCCCTGTATGACGACACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein; TPR Repeat; Tetratricopeptide TPR_2 Repeat-Containing Protein

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTRNDSGDLISRNDSTNHMNTTQPQKMLPEATFSDRMLEIGIKYKKQLTALVVVICLAAGGTLFWMQKTKVDEVQASLAL
AKITPWIEMGDVNKAVNGEGSIKGLNSIIKTWGGTPSGKTARLYMAYILLNSGKPDDALSIYKGFSSDNKDLQASALAGA
AACHVQKKAFAEAAPEYEKASETAENETLKSMYLTKAAESYSAAGQADKAAKLYDQVIKTWPATSSAGMAQRALLRLAGA
GVQIPQI

Sequences:

>Translated_247_residues
MTRNDSGDLISRNDSTNHMNTTQPQKMLPEATFSDRMLEIGIKYKKQLTALVVVICLAAGGTLFWMQKTKVDEVQASLAL
AKITPWIEMGDVNKAVNGEGSIKGLNSIIKTWGGTPSGKTARLYMAYILLNSGKPDDALSIYKGFSSDNKDLQASALAGA
AACHVQKKAFAEAAPEYEKASETAENETLKSMYLTKAAESYSAAGQADKAAKLYDQVIKTWPATSSAGMAQRALLRLAGA
GVQIPQI
>Mature_246_residues
TRNDSGDLISRNDSTNHMNTTQPQKMLPEATFSDRMLEIGIKYKKQLTALVVVICLAAGGTLFWMQKTKVDEVQASLALA
KITPWIEMGDVNKAVNGEGSIKGLNSIIKTWGGTPSGKTARLYMAYILLNSGKPDDALSIYKGFSSDNKDLQASALAGAA
ACHVQKKAFAEAAPEYEKASETAENETLKSMYLTKAAESYSAAGQADKAAKLYDQVIKTWPATSSAGMAQRALLRLAGAG
VQIPQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26486; Mature: 26354

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNDSGDLISRNDSTNHMNTTQPQKMLPEATFSDRMLEIGIKYKKQLTALVVVICLAAG
CCCCCCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTLFWMQKTKVDEVQASLALAKITPWIEMGDVNKAVNGEGSIKGLNSIIKTWGGTPSGKT
CEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
ARLYMAYILLNSGKPDDALSIYKGFSSDNKDLQASALAGAAACHVQKKAFAEAAPEYEKA
HHHEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SETAENETLKSMYLTKAAESYSAAGQADKAAKLYDQVIKTWPATSSAGMAQRALLRLAGA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
GVQIPQI
CCCCCCC
>Mature Secondary Structure 
TRNDSGDLISRNDSTNHMNTTQPQKMLPEATFSDRMLEIGIKYKKQLTALVVVICLAAG
CCCCCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTLFWMQKTKVDEVQASLALAKITPWIEMGDVNKAVNGEGSIKGLNSIIKTWGGTPSGKT
CEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
ARLYMAYILLNSGKPDDALSIYKGFSSDNKDLQASALAGAAACHVQKKAFAEAAPEYEKA
HHHEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SETAENETLKSMYLTKAAESYSAAGQADKAAKLYDQVIKTWPATSSAGMAQRALLRLAGA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
GVQIPQI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA