| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674615
Identifier: 21674615
GI number: 21674615
Start: 1705512
End: 1706387
Strand: Direct
Name: 21674615
Synonym: CT1801
Alternate gene names: NA
Gene position: 1705512-1706387 (Clockwise)
Preceding gene: 21674614
Following gene: 21674617
Centisome position: 79.14
GC content: 59.02
Gene sequence:
>876_bases ATGAATAAAAGCACTTCACTTGTGAGCGCCGCGATGCTTGGTGCGCTTTGCGCCACAGCGCCGCTCTCAACAGCCTCGGC TGAATCGGCCATCAAGCCAACCTTCGATACGCTCTTCGAGCCGCTCTTGGCCGACCCGATGGAGCCGCGAATCGCCGTCA TGCCCAAGCTCAACAAGAAGCAGCTCCAGCTCGATATCGGCACCTCGGCCGACCTGTACCAGAACAGCAGCAAAACCTTT GCCGTCGGCATCGACTTCGCCACCTGGTCACTCCTGAACAGAACCAGCAACTTCAAGTTCCCGGTGGACTGCATCGACTA CATGTTCGGTATCAACACCACCTTCCGCCACCAGTTCAAGGACAAATTACTCTCGTTCGATGAAGCGAGCGTGCGGGTGC GTCTGAGCCACATCTCGGCCCATTTCGAGGATGGCCACACCGACGACCACGGCAACTGGCTCAACCCCGGCGACTCCCCC TTCGGCATTCCCTTTACCTACAGCCGCGAGTTCGTCAACGTCACGGGCGCACTCTCCGCGCCAGGTCGCAGGGTTTACCT GGGCTACCAGTACCTGTACCACACGTTGCCGGACGAGATCAGCCCCAGCTCGTTCCAGGCGGGCGTGGAGATCGGCCTTC CGGCCAACGCCTACGTGGCCGCCGACTTCAAACTGCTTCCCAAATGGGATTGGAACGAGGGCAAAACCGATGGCTACCGC GGCACCTGGAACCTGCAAGCCGGAATGCGCCTCACCTCGATCGGCCTGAAAAATGTGAGAGTGGCCGCCAACTACTTCTC CGGCATGAGCCGTCAGGGCATGTACTTCTACAAGCCCGAAAGCTACACGACGCTGGGAATGATTGTCGATTTGTAA
Upstream 100 bases:
>100_bases CACCGGCTGCTGGCCAAGTGACGCGGCGCATCGCTCCGGAGCGATTGACTTTACACACAACGTTCTACACACAACAACAT CCGATCAAGGATCACACACC
Downstream 100 bases:
>100_bases GGTAAAGGACTCAAAGGACAGCAAAGACAGGAAGCCTCTCGACCGGATCGGGAGGCTTCCTGCATTTTACAGCGTCGAGT CGAAAAACTCCGGACAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNKSTSLVSAAMLGALCATAPLSTASAESAIKPTFDTLFEPLLADPMEPRIAVMPKLNKKQLQLDIGTSADLYQNSSKTF AVGIDFATWSLLNRTSNFKFPVDCIDYMFGINTTFRHQFKDKLLSFDEASVRVRLSHISAHFEDGHTDDHGNWLNPGDSP FGIPFTYSREFVNVTGALSAPGRRVYLGYQYLYHTLPDEISPSSFQAGVEIGLPANAYVAADFKLLPKWDWNEGKTDGYR GTWNLQAGMRLTSIGLKNVRVAANYFSGMSRQGMYFYKPESYTTLGMIVDL
Sequences:
>Translated_291_residues MNKSTSLVSAAMLGALCATAPLSTASAESAIKPTFDTLFEPLLADPMEPRIAVMPKLNKKQLQLDIGTSADLYQNSSKTF AVGIDFATWSLLNRTSNFKFPVDCIDYMFGINTTFRHQFKDKLLSFDEASVRVRLSHISAHFEDGHTDDHGNWLNPGDSP FGIPFTYSREFVNVTGALSAPGRRVYLGYQYLYHTLPDEISPSSFQAGVEIGLPANAYVAADFKLLPKWDWNEGKTDGYR GTWNLQAGMRLTSIGLKNVRVAANYFSGMSRQGMYFYKPESYTTLGMIVDL >Mature_291_residues MNKSTSLVSAAMLGALCATAPLSTASAESAIKPTFDTLFEPLLADPMEPRIAVMPKLNKKQLQLDIGTSADLYQNSSKTF AVGIDFATWSLLNRTSNFKFPVDCIDYMFGINTTFRHQFKDKLLSFDEASVRVRLSHISAHFEDGHTDDHGNWLNPGDSP FGIPFTYSREFVNVTGALSAPGRRVYLGYQYLYHTLPDEISPSSFQAGVEIGLPANAYVAADFKLLPKWDWNEGKTDGYR GTWNLQAGMRLTSIGLKNVRVAANYFSGMSRQGMYFYKPESYTTLGMIVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32339; Mature: 32339
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSTSLVSAAMLGALCATAPLSTASAESAIKPTFDTLFEPLLADPMEPRIAVMPKLNKK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCE QLQLDIGTSADLYQNSSKTFAVGIDFATWSLLNRTSNFKFPVDCIDYMFGINTTFRHQFK EEEEEECCCHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHH DKLLSFDEASVRVRLSHISAHFEDGHTDDHGNWLNPGDSPFGIPFTYSREFVNVTGALSA HHHHCCCCCEEEEEEEEHEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC PGRRVYLGYQYLYHTLPDEISPSSFQAGVEIGLPANAYVAADFKLLPKWDWNEGKTDGYR CCCEEEEEHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECEEEECCCCCCCCCCCCCC GTWNLQAGMRLTSIGLKNVRVAANYFSGMSRQGMYFYKPESYTTLGMIVDL EEEEECCCCEEEECCCCCEEEEEHHHCCCCCCCEEEECCCCCEEEEEEEEC >Mature Secondary Structure MNKSTSLVSAAMLGALCATAPLSTASAESAIKPTFDTLFEPLLADPMEPRIAVMPKLNKK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCE QLQLDIGTSADLYQNSSKTFAVGIDFATWSLLNRTSNFKFPVDCIDYMFGINTTFRHQFK EEEEEECCCHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHH DKLLSFDEASVRVRLSHISAHFEDGHTDDHGNWLNPGDSPFGIPFTYSREFVNVTGALSA HHHHCCCCCEEEEEEEEHEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC PGRRVYLGYQYLYHTLPDEISPSSFQAGVEIGLPANAYVAADFKLLPKWDWNEGKTDGYR CCCEEEEEHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECEEEECCCCCCCCCCCCCC GTWNLQAGMRLTSIGLKNVRVAANYFSGMSRQGMYFYKPESYTTLGMIVDL EEEEECCCCEEEECCCCCEEEEEHHHCCCCCCCEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA