| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 21674599
GI number: 21674599
Start: 1690600
End: 1691727
Strand: Direct
Name: mrp [H]
Synonym: CT1785
Alternate gene names: 21674599
Gene position: 1690600-1691727 (Clockwise)
Preceding gene: 21674598
Following gene: 21674600
Centisome position: 78.45
GC content: 61.44
Gene sequence:
>1128_bases ATGTCTTCAATACAGAAATCGCAGATCGAGGCCGCGCTTGGCACGGTCATGGAACCCGACCTCGGTCGTGACCTCATGAC GCTCGGCATGGTTGAAAACATCGCCGTCGATGAGGCTGGCAACGTTTCTTTCACTGTGGTGCTCACCACACCGGCCTGCC CAATGAAAGAGAAAATCAAGAACTCCTGCGTCGAGGCCATCAAGGCCGCCGTACCGGAGGTGGGTTCGATCGACGTCAAC ATGACCTCGAAGGTCACCTCTTCGTGCAGCCACGGTGGTCACGGCAATCACGACGGGCACGGCCATCATGGTGCTCAGGG CGGCCACGGCGCTCCGCAGAAAATCGACCTGCCGAACGTCAAGAACATCATTGCCGTGGCATCCGGCAAGGGCGGCGTCG GAAAATCGACCGTCTCGCTCAACCTCGCCGTCAGCCTTGCCGCGTCGGGCGCGAAGGTTGGCCTGATCGACGCCGATCTC TACGGCCCGAGCATTCCGACAATGGTCGGCCTCCAGAACGTCAAGCCCGAGGTGCAGAACCAGAAGCTCATGCCGATCGA GAAGTTCGGCGTCAAGATGATGTCCATCGGCTTCCTCGTTGATCCAGAGACAGCCTTGATCTGGCGCGGCCCGATGGCTT CGAGCGCCATGCGCCAGCTCATCACCGACGTTGACTGGCAGGAGCTCGACTACCTGATCTTCGACCTGCCTCCCGGCACC GGCGACATTCAGCTCACCCTCGTGCAGAACCTCGCCATCAGCGGCGCGGTCATCGTCACCACCCCTCAGGAGGTGGCACT CGCCGACGTCGCCAAGGCGGTCACGATGTTCCGAAAGGTTGGCGTGCCGATTCTCGGTCTCGTCGAGAACATGAGCTGGT ACGAGCTGCCCGACGGCACACGCGACTACATCTTCGGACGCCAGGGCGGTGAAACATTCGCCAAAACCAACGCAATAACC TTCCTCGGTTCGATCCCGATCAGCAGTTCGGTGCGCGAAGGCGGCGACAACGGCATTCCGGCGATCATCGCCAACCCGGA CGCGCCGACCTCGCAGGCGGCAAGCCGCGTCGCGGGAGAGATTGCCCGGCAGGTCTCGATCCTGAACGCAAACTGCTCGA TGAACTGA
Upstream 100 bases:
>100_bases CGTAAAGCGCAGTTCTTGTAACGGCTTTAACCAAGGCGGTGCTGGCTGACCAAACTGATCACACAAATCCGATTAATCTA AAATCATAAACTAATACTCT
Downstream 100 bases:
>100_bases GATCACCGTCGCGAAATGCAACCCTGAAAAATTTCGGATTTTTCAGGGTTGCCCCTCTGTTATTATATTGGACTCACTCC GGAAGGCTTCCGCCCCCGTT
Product: ATP-binding Mrp/Nbp35 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSSIQKSQIEAALGTVMEPDLGRDLMTLGMVENIAVDEAGNVSFTVVLTTPACPMKEKIKNSCVEAIKAAVPEVGSIDVN MTSKVTSSCSHGGHGNHDGHGHHGAQGGHGAPQKIDLPNVKNIIAVASGKGGVGKSTVSLNLAVSLAASGAKVGLIDADL YGPSIPTMVGLQNVKPEVQNQKLMPIEKFGVKMMSIGFLVDPETALIWRGPMASSAMRQLITDVDWQELDYLIFDLPPGT GDIQLTLVQNLAISGAVIVTTPQEVALADVAKAVTMFRKVGVPILGLVENMSWYELPDGTRDYIFGRQGGETFAKTNAIT FLGSIPISSSVREGGDNGIPAIIANPDAPTSQAASRVAGEIARQVSILNANCSMN
Sequences:
>Translated_375_residues MSSIQKSQIEAALGTVMEPDLGRDLMTLGMVENIAVDEAGNVSFTVVLTTPACPMKEKIKNSCVEAIKAAVPEVGSIDVN MTSKVTSSCSHGGHGNHDGHGHHGAQGGHGAPQKIDLPNVKNIIAVASGKGGVGKSTVSLNLAVSLAASGAKVGLIDADL YGPSIPTMVGLQNVKPEVQNQKLMPIEKFGVKMMSIGFLVDPETALIWRGPMASSAMRQLITDVDWQELDYLIFDLPPGT GDIQLTLVQNLAISGAVIVTTPQEVALADVAKAVTMFRKVGVPILGLVENMSWYELPDGTRDYIFGRQGGETFAKTNAIT FLGSIPISSSVREGGDNGIPAIIANPDAPTSQAASRVAGEIARQVSILNANCSMN >Mature_374_residues SSIQKSQIEAALGTVMEPDLGRDLMTLGMVENIAVDEAGNVSFTVVLTTPACPMKEKIKNSCVEAIKAAVPEVGSIDVNM TSKVTSSCSHGGHGNHDGHGHHGAQGGHGAPQKIDLPNVKNIIAVASGKGGVGKSTVSLNLAVSLAASGAKVGLIDADLY GPSIPTMVGLQNVKPEVQNQKLMPIEKFGVKMMSIGFLVDPETALIWRGPMASSAMRQLITDVDWQELDYLIFDLPPGTG DIQLTLVQNLAISGAVIVTTPQEVALADVAKAVTMFRKVGVPILGLVENMSWYELPDGTRDYIFGRQGGETFAKTNAITF LGSIPISSSVREGGDNGIPAIIANPDAPTSQAASRVAGEIARQVSILNANCSMN
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=261, Percent_Identity=45.9770114942529, Blast_Score=234, Evalue=7e-62, Organism=Homo sapiens, GI6912540, Length=254, Percent_Identity=40.1574803149606, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI118572611, Length=259, Percent_Identity=41.3127413127413, Blast_Score=178, Evalue=6e-45, Organism=Escherichia coli, GI87082045, Length=262, Percent_Identity=49.618320610687, Blast_Score=244, Evalue=7e-66, Organism=Caenorhabditis elegans, GI25143050, Length=275, Percent_Identity=36.3636363636364, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6322188, Length=233, Percent_Identity=41.2017167381974, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321347, Length=251, Percent_Identity=38.6454183266932, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI221511043, Length=270, Percent_Identity=39.2592592592593, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24667611, Length=253, Percent_Identity=43.0830039525692, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI19921440, Length=235, Percent_Identity=37.4468085106383, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 39210; Mature: 39078
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIQKSQIEAALGTVMEPDLGRDLMTLGMVENIAVDEAGNVSFTVVLTTPACPMKEKIK CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHH NSCVEAIKAAVPEVGSIDVNMTSKVTSSCSHGGHGNHDGHGHHGAQGGHGAPQKIDLPNV HHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNIIAVASGKGGVGKSTVSLNLAVSLAASGAKVGLIDADLYGPSIPTMVGLQNVKPEVQN CCEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCHHHCCCCCCC QKLMPIEKFGVKMMSIGFLVDPETALIWRGPMASSAMRQLITDVDWQELDYLIFDLPPGT CCCCCHHHHCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCHHHCCEEEEECCCCC GDIQLTLVQNLAISGAVIVTTPQEVALADVAKAVTMFRKVGVPILGLVENMSWYELPDGT CCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCC RDYIFGRQGGETFAKTNAITFLGSIPISSSVREGGDNGIPAIIANPDAPTSQAASRVAGE HHEEEECCCCCCHHHCCEEEEEECCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH IARQVSILNANCSMN HHHHHEEEECCCCCC >Mature Secondary Structure SSIQKSQIEAALGTVMEPDLGRDLMTLGMVENIAVDEAGNVSFTVVLTTPACPMKEKIK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHH NSCVEAIKAAVPEVGSIDVNMTSKVTSSCSHGGHGNHDGHGHHGAQGGHGAPQKIDLPNV HHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNIIAVASGKGGVGKSTVSLNLAVSLAASGAKVGLIDADLYGPSIPTMVGLQNVKPEVQN CCEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCHHHCCCCCCC QKLMPIEKFGVKMMSIGFLVDPETALIWRGPMASSAMRQLITDVDWQELDYLIFDLPPGT CCCCCHHHHCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCHHHCCEEEEECCCCC GDIQLTLVQNLAISGAVIVTTPQEVALADVAKAVTMFRKVGVPILGLVENMSWYELPDGT CCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCC RDYIFGRQGGETFAKTNAITFLGSIPISSSVREGGDNGIPAIIANPDAPTSQAASRVAGE HHEEEECCCCCCHHHCCEEEEEECCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH IARQVSILNANCSMN HHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]