| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is recX
Identifier: 21674592
GI number: 21674592
Start: 1684942
End: 1685424
Strand: Direct
Name: recX
Synonym: CT1778
Alternate gene names: 21674592
Gene position: 1684942-1685424 (Clockwise)
Preceding gene: 21674591
Following gene: 21674598
Centisome position: 78.19
GC content: 57.56
Gene sequence:
>483_bases ATGGATGAGGGAAAAAAGAGTTCAGCGCTCGACCATGCCTTGCGGCTCCTGGCTGGAAGGGCCCACGGCAGGGCTGAACT CGAATCCAAGCTGAAGAAAAAAGGGTTCGATTCCGAATCGATCGCCAAAGCTCTTGCAAGACTCGACGAGCTCAACCTCA CCGACGACCGCGCTTTCGCGCAAAGCTGCACAGCGAGCATGGCCCGCCGCAAGCCTGAAGGCCGCCTCAAGACCCGCGCC CGCCTCAAGCAGAAAGGGCTCCCCGATAACATCATCGACGAAGCGCTCAACGGCTGTGACCAGACCGAGTTGTGCCGGTC AGCCGCCGAAAAAAAGCTGCGAACCCTCCCGGCCTCCCCTGACCAGAAAAAGAAAAAACTCATCACCTTTCTCAAGAACC GCGGTTTCGACTGGGAAACCATTCGTGAAACGGTGAAGCTGGTGTTGGGCGAAGAATCGGCCAGATCCGACCAATTGGAC TGA
Upstream 100 bases:
>100_bases AGCATCGCCTTCAAAAAGCACCTGGCCGCCCAGTTAAAGGCCTTCGAGCGTAACCACAAGATGAACCCAGCCATGCTTTC AGGCGTGAAACCGGTCATGA
Downstream 100 bases:
>100_bases TCTGGCAAACGCCCCCAAAACAAAAGGGCGAACCAACCAGCTCGCCCCCTTCAATGATCAACGATCCATTTTATCAGCTA CTCTTCCCCCACGTGCACCA
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDEGKKSSALDHALRLLAGRAHGRAELESKLKKKGFDSESIAKALARLDELNLTDDRAFAQSCTASMARRKPEGRLKTRA RLKQKGLPDNIIDEALNGCDQTELCRSAAEKKLRTLPASPDQKKKKLITFLKNRGFDWETIRETVKLVLGEESARSDQLD
Sequences:
>Translated_160_residues MDEGKKSSALDHALRLLAGRAHGRAELESKLKKKGFDSESIAKALARLDELNLTDDRAFAQSCTASMARRKPEGRLKTRA RLKQKGLPDNIIDEALNGCDQTELCRSAAEKKLRTLPASPDQKKKKLITFLKNRGFDWETIRETVKLVLGEESARSDQLD >Mature_160_residues MDEGKKSSALDHALRLLAGRAHGRAELESKLKKKGFDSESIAKALARLDELNLTDDRAFAQSCTASMARRKPEGRLKTRA RLKQKGLPDNIIDEALNGCDQTELCRSAAEKKLRTLPASPDQKKKKLITFLKNRGFDWETIRETVKLVLGEESARSDQLD
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_CHLTE (Q8KBK8)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662657.1 - ProteinModelPortal: Q8KBK8 - SMR: Q8KBK8 - GeneID: 1008141 - GenomeReviews: AE006470_GR - KEGG: cte:CT1778 - NMPDR: fig|194439.1.peg.1751 - TIGR: CT1778 - HOGENOM: HBG638240 - OMA: TRARLKQ - ProtClustDB: PRK00117 - BioCyc: CTEP194439:CT_1778-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 17891; Mature: 17891
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEGKKSSALDHALRLLAGRAHGRAELESKLKKKGFDSESIAKALARLDELNLTDDRAFA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH QSCTASMARRKPEGRLKTRARLKQKGLPDNIIDEALNGCDQTELCRSAAEKKLRTLPASP HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC DQKKKKLITFLKNRGFDWETIRETVKLVLGEESARSDQLD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDEGKKSSALDHALRLLAGRAHGRAELESKLKKKGFDSESIAKALARLDELNLTDDRAFA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH QSCTASMARRKPEGRLKTRARLKQKGLPDNIIDEALNGCDQTELCRSAAEKKLRTLPASP HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC DQKKKKLITFLKNRGFDWETIRETVKLVLGEESARSDQLD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901