| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is mesJ
Identifier: 21674432
GI number: 21674432
Start: 1520000
End: 1520995
Strand: Reverse
Name: mesJ
Synonym: CT1614
Alternate gene names: 21674432
Gene position: 1520995-1520000 (Counterclockwise)
Preceding gene: 21674435
Following gene: 21674426
Centisome position: 70.58
GC content: 57.03
Gene sequence:
>996_bases GTGAACAAGACCGAGAAAAAATTTCTTGAAAACATGCATCGGCAGAAGCTTGTCGCGAACGGCGACGCGGTGCTGCTGGC CGTTTCCGGCGGCCCGGACTCGATGGCGCTGCTGCATCTGTTTGCGTCGGTTGCGTCGGTGCTGCATTGCCGCCTCGGCG TGGCGCACTGCAATTTCATGCTGCGTGGGGATGCGAGTGATGCCGACGAATCGTTCGTCCGCGATGCGTGCGCCGAGCTT GGCATCGACTTTCATGTTCGGCGATTCGATACGGCGTCGGTCTCATCAGCCTGGAAAAAATCGATTGAAGAGACGGCCCG CTTGCTGCGTTACGACTTTTTCGGCGAGCTTTGCCGCGAGGCCAGTTATACCCGGATCGCCACCGGGCACCACAGCGATG ACAATGCCGAGACCGTGCTTTTCAATCTCTTTCGTGGCGCAGGGATTTCAGGTCTGCGGGGAATTCGGGTACGGCACGGT GCAATCATCAGACCTCTTTTGCCCTTTACCCGACGGGAGATCGTAGCATATCTCGAAGAAAAACGGGTCGTCTGGAGAGA TGATCACACCAACGAAGGAATCGAGTACGACCGTAATTTTATCCGCAATCGTGTGATTCCGGTGATCGAGGAGCGTTTTG CGCACAAGCTCATGCCGTCGCTGCAACGCATTTCAGAACATGCGGGCGAACTCGAAGAGTTCATCGATCTCCACATCTCG CGCCTGCTCGAAGCGCATCCAGGCCTCGACCTTGCAGGCGGCAAGCTGCACGTCGGTACGATGCGGCAACTATCGATGTT CGAGCGAAAAGAGATTCTGAAGCGGGCCTTGAAGTTACAGGGGCTTTCGGTGGGCAGCAATGTCTTGAACAGAATTGCGG GACTGCTCGACAATCAGGCGGGCCGGAGCGTTCCGGCTGGCGCGGGCGTCGAGGTGGTTCTGCATGACGGATTCCTGCGA TTCCGGCAAACCGGTAATCCATCAGATCATCGGTAA
Upstream 100 bases:
>100_bases TTGCAAAAACGGCCGAGCGTATATATTATGATGCTCTGCGATGGCCGGGAGTGCCGCATCGAGCGCCAATTCCACATCGA GCAAATCGACAAACGATCCA
Downstream 100 bases:
>100_bases CGTGCTCACTCCTTTTTGCCGCTTTTCTTGAAAATGGTCTCCGGCAGGTCAGCCGTGACGATGACCGATTCGAGGTTCTG GCTCACCTTGAGGTGTTTGA
Product: MesJ protein
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MNKTEKKFLENMHRQKLVANGDAVLLAVSGGPDSMALLHLFASVASVLHCRLGVAHCNFMLRGDASDADESFVRDACAEL GIDFHVRRFDTASVSSAWKKSIEETARLLRYDFFGELCREASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGIRVRHG AIIRPLLPFTRREIVAYLEEKRVVWRDDHTNEGIEYDRNFIRNRVIPVIEERFAHKLMPSLQRISEHAGELEEFIDLHIS RLLEAHPGLDLAGGKLHVGTMRQLSMFERKEILKRALKLQGLSVGSNVLNRIAGLLDNQAGRSVPAGAGVEVVLHDGFLR FRQTGNPSDHR
Sequences:
>Translated_331_residues MNKTEKKFLENMHRQKLVANGDAVLLAVSGGPDSMALLHLFASVASVLHCRLGVAHCNFMLRGDASDADESFVRDACAEL GIDFHVRRFDTASVSSAWKKSIEETARLLRYDFFGELCREASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGIRVRHG AIIRPLLPFTRREIVAYLEEKRVVWRDDHTNEGIEYDRNFIRNRVIPVIEERFAHKLMPSLQRISEHAGELEEFIDLHIS RLLEAHPGLDLAGGKLHVGTMRQLSMFERKEILKRALKLQGLSVGSNVLNRIAGLLDNQAGRSVPAGAGVEVVLHDGFLR FRQTGNPSDHR >Mature_331_residues MNKTEKKFLENMHRQKLVANGDAVLLAVSGGPDSMALLHLFASVASVLHCRLGVAHCNFMLRGDASDADESFVRDACAEL GIDFHVRRFDTASVSSAWKKSIEETARLLRYDFFGELCREASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGIRVRHG AIIRPLLPFTRREIVAYLEEKRVVWRDDHTNEGIEYDRNFIRNRVIPVIEERFAHKLMPSLQRISEHAGELEEFIDLHIS RLLEAHPGLDLAGGKLHVGTMRQLSMFERKEILKRALKLQGLSVGSNVLNRIAGLLDNQAGRSVPAGAGVEVVLHDGFLR FRQTGNPSDHR
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family
Homologues:
Organism=Escherichia coli, GI1786386, Length=213, Percent_Identity=32.8638497652582, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TILS_CHLTE (Q8KC15)
Other databases:
- EMBL: AY005137 - EMBL: AE006470 - RefSeq: NP_662497.1 - ProteinModelPortal: Q8KC15 - SMR: Q8KC15 - GeneID: 1006109 - GenomeReviews: AE006470_GR - KEGG: cte:CT1614 - NMPDR: fig|194439.1.peg.1591 - TIGR: CT1614 - HOGENOM: HBG405712 - OMA: FNLFRGT - ProtClustDB: CLSK637855 - BioCyc: CTEP194439:CT_1614-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_01161 - InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR014729 - InterPro: IPR011063 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11807:SF2 - TIGRFAMs: TIGR02432
Pfam domain/function: PF01171 ATP_bind_3
EC number: NA
Molecular weight: Translated: 37136; Mature: 37136
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTEKKFLENMHRQKLVANGDAVLLAVSGGPDSMALLHLFASVASVLHCRLGVAHCNFM CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE LRGDASDADESFVRDACAELGIDFHVRRFDTASVSSAWKKSIEETARLLRYDFFGELCRE EECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGIRVRHGAIIRPLLPFTRREIVAYLEE CCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH KRVVWRDDHTNEGIEYDRNFIRNRVIPVIEERFAHKLMPSLQRISEHAGELEEFIDLHIS CCCEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLEAHPGLDLAGGKLHVGTMRQLSMFERKEILKRALKLQGLSVGSNVLNRIAGLLDNQA HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GRSVPAGAGVEVVLHDGFLRFRQTGNPSDHR CCCCCCCCCEEEEEECCHHHHHCCCCCCCCC >Mature Secondary Structure MNKTEKKFLENMHRQKLVANGDAVLLAVSGGPDSMALLHLFASVASVLHCRLGVAHCNFM CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE LRGDASDADESFVRDACAELGIDFHVRRFDTASVSSAWKKSIEETARLLRYDFFGELCRE EECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGIRVRHGAIIRPLLPFTRREIVAYLEE CCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH KRVVWRDDHTNEGIEYDRNFIRNRVIPVIEERFAHKLMPSLQRISEHAGELEEFIDLHIS CCCEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLEAHPGLDLAGGKLHVGTMRQLSMFERKEILKRALKLQGLSVGSNVLNRIAGLLDNQA HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GRSVPAGAGVEVVLHDGFLRFRQTGNPSDHR CCCCCCCCCEEEEEECCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10976061; 12093901