| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pepP [H]
Identifier: 21674426
GI number: 21674426
Start: 1514689
End: 1515783
Strand: Reverse
Name: pepP [H]
Synonym: CT1608
Alternate gene names: 21674426
Gene position: 1515783-1514689 (Counterclockwise)
Preceding gene: 21674432
Following gene: 21674425
Centisome position: 70.34
GC content: 59.91
Gene sequence:
>1095_bases ATGTCGCAAGACCTTCTTCATACCTATCGCAGTAGCCTGCGCGCTAAAATTTTCAGAAAAATGGCCGCTGCCGGCCTGGA CTCTCTTCTGGTGACCGATCTGGCGACCATTCGCTGGCTGACCGGTTTCAGTGGTTCCAACGCCAAACTGCTCTTCGCCG GAGATTCAACCTCCGTGCTTTTTACCGATTTCCGGTATCAGGAGCAGGTTCGTCAGGAGACGAGTGGCATTGCTACGGTG ATTCTCAAAGACCCGCTTCCGGTCGAGCTGGCGTCAGGTTTGTTCCGGCTCGGAGATCGCATGGCGTTGCAGGCCGACCA CGTTACCTGGCACGAGCAGCAGCAGCTTTCGGAGAAGATGGGTAACCGTGAGTTTACGCCCGTTTCGTCATTTTTCGACG AGTTTCGCGAGATCAAAGACATCGAGGAGCTCGACCGGATGCGTCGCGCTGTCGCCCTCAGCGAAACCGTGCTCGAAGCG GTGATCGGCATGATCGGCCCCGGCGTCACCGAAATCGACATCGCTGCTGAAATTACCTATCGCCACCGCAAGCTCGGTGC GGAGAAGGACTCGTTCGACCCCATTGTGGCTGGAGGCATCCGTGGTGCGATGCCGCACGCCAAGCCGACCGCAGTTGCCT TCGAGCCGGGGGCCCTGATCGTTATCGACATGGGCTGCATTGTCGATGGCTACGCCTCAGACCAGACTCGCACAGTCGCC TTCGGCAAGGTTTCCGAGGAGCAGCGGACGGTCTATCGCATTGTGCAGGAGGCGCAGCAGCTTGGTATCGACGCAGCGAA AGCCGGAATGGCCGCCCGCGACCTCGATGCTGAGGTGCGTAACTTCATCGCCGCTGCAGGCTACGGCGAAGCGTTCGGTC ATGGCCTTGGCCACGGTGTTGGCGTCGAAGTGCACGAAGCCCCGCGTGTCGGCACAGCCTCTACCGGCACACTCCGCGAA GGCACGCTTTTCACCATCGAACCGGGCATCTACCTTCCGGGCCGCTTCGGCGTGCGCATCGAAGACATGGTAGCCCTCGG CCCCAACGGCGCGGAACCGTTGCAGCGGTTTACCAAGGAGCTTATCGAACTTTAA
Upstream 100 bases:
>100_bases TACTAACTGTCGGCCCCTTTAGCAACAAAAGCCCTTTTGCACAAAGCAGATGAGCGTTTCGTGGCGGCTGACGCGATTTT TTCATTCTGTTTTCCGATTC
Downstream 100 bases:
>100_bases TTGCGTGGTGAATTATGAGCGAATCAAAATCCGGCGGCTATTGCATGGTCATTACGACGGCCCCAAGCCGTGAGGAGGCT GAAAAGCTGGCGCAAGGTAT
Product: aminopeptidase P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSQDLLHTYRSSLRAKIFRKMAAAGLDSLLVTDLATIRWLTGFSGSNAKLLFAGDSTSVLFTDFRYQEQVRQETSGIATV ILKDPLPVELASGLFRLGDRMALQADHVTWHEQQQLSEKMGNREFTPVSSFFDEFREIKDIEELDRMRRAVALSETVLEA VIGMIGPGVTEIDIAAEITYRHRKLGAEKDSFDPIVAGGIRGAMPHAKPTAVAFEPGALIVIDMGCIVDGYASDQTRTVA FGKVSEEQRTVYRIVQEAQQLGIDAAKAGMAARDLDAEVRNFIAAAGYGEAFGHGLGHGVGVEVHEAPRVGTASTGTLRE GTLFTIEPGIYLPGRFGVRIEDMVALGPNGAEPLQRFTKELIEL
Sequences:
>Translated_364_residues MSQDLLHTYRSSLRAKIFRKMAAAGLDSLLVTDLATIRWLTGFSGSNAKLLFAGDSTSVLFTDFRYQEQVRQETSGIATV ILKDPLPVELASGLFRLGDRMALQADHVTWHEQQQLSEKMGNREFTPVSSFFDEFREIKDIEELDRMRRAVALSETVLEA VIGMIGPGVTEIDIAAEITYRHRKLGAEKDSFDPIVAGGIRGAMPHAKPTAVAFEPGALIVIDMGCIVDGYASDQTRTVA FGKVSEEQRTVYRIVQEAQQLGIDAAKAGMAARDLDAEVRNFIAAAGYGEAFGHGLGHGVGVEVHEAPRVGTASTGTLRE GTLFTIEPGIYLPGRFGVRIEDMVALGPNGAEPLQRFTKELIEL >Mature_363_residues SQDLLHTYRSSLRAKIFRKMAAAGLDSLLVTDLATIRWLTGFSGSNAKLLFAGDSTSVLFTDFRYQEQVRQETSGIATVI LKDPLPVELASGLFRLGDRMALQADHVTWHEQQQLSEKMGNREFTPVSSFFDEFREIKDIEELDRMRRAVALSETVLEAV IGMIGPGVTEIDIAAEITYRHRKLGAEKDSFDPIVAGGIRGAMPHAKPTAVAFEPGALIVIDMGCIVDGYASDQTRTVAF GKVSEEQRTVYRIVQEAQQLGIDAAKAGMAARDLDAEVRNFIAAAGYGEAFGHGLGHGVGVEVHEAPRVGTASTGTLREG TLFTIEPGIYLPGRFGVRIEDMVALGPNGAEPLQRFTKELIEL
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=251, Percent_Identity=28.2868525896414, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI164420681, Length=198, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI264681563, Length=229, Percent_Identity=31.0043668122271, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI93141226, Length=159, Percent_Identity=32.0754716981132, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1788728, Length=366, Percent_Identity=35.2459016393443, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1789275, Length=249, Percent_Identity=28.9156626506024, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786364, Length=207, Percent_Identity=29.951690821256, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320922, Length=253, Percent_Identity=27.6679841897233, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321118, Length=297, Percent_Identity=26.2626262626263, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI19920384, Length=300, Percent_Identity=27.3333333333333, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 39672; Mature: 39541
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDLLHTYRSSLRAKIFRKMAAAGLDSLLVTDLATIRWLTGFSGSNAKLLFAGDSTSVL CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE FTDFRYQEQVRQETSGIATVILKDPLPVELASGLFRLGDRMALQADHVTWHEQQQLSEKM EEHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHH GNREFTPVSSFFDEFREIKDIEELDRMRRAVALSETVLEAVIGMIGPGVTEIDIAAEITY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH RHRKLGAEKDSFDPIVAGGIRGAMPHAKPTAVAFEPGALIVIDMGCIVDGYASDQTRTVA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEECCCCCCEEEEE FGKVSEEQRTVYRIVQEAQQLGIDAAKAGMAARDLDAEVRNFIAAAGYGEAFGHGLGHGV ECCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC GVEVHEAPRVGTASTGTLREGTLFTIEPGIYLPGRFGVRIEDMVALGPNGAEPLQRFTKE CEEEECCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCEEEHEEEECCCCHHHHHHHHHH LIEL HHCC >Mature Secondary Structure SQDLLHTYRSSLRAKIFRKMAAAGLDSLLVTDLATIRWLTGFSGSNAKLLFAGDSTSVL CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE FTDFRYQEQVRQETSGIATVILKDPLPVELASGLFRLGDRMALQADHVTWHEQQQLSEKM EEHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHH GNREFTPVSSFFDEFREIKDIEELDRMRRAVALSETVLEAVIGMIGPGVTEIDIAAEITY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH RHRKLGAEKDSFDPIVAGGIRGAMPHAKPTAVAFEPGALIVIDMGCIVDGYASDQTRTVA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEECCCCCCEEEEE FGKVSEEQRTVYRIVQEAQQLGIDAAKAGMAARDLDAEVRNFIAAAGYGEAFGHGLGHGV ECCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC GVEVHEAPRVGTASTGTLREGTLFTIEPGIYLPGRFGVRIEDMVALGPNGAEPLQRFTKE CEEEECCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCEEEHEEEECCCCHHHHHHHHHH LIEL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]