Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674401

Identifier: 21674401

GI number: 21674401

Start: 1491158

End: 1491961

Strand: Reverse

Name: 21674401

Synonym: CT1583

Alternate gene names: NA

Gene position: 1491961-1491158 (Counterclockwise)

Preceding gene: 21674402

Following gene: 21674399

Centisome position: 69.23

GC content: 60.57

Gene sequence:

>804_bases
GTGTCGTCAAAGTTACAATCGGTGCATCATGAGGCGGCCAGAAAGGCGCAGCGGTGGACTTTCCGCGAACAGTTCCTCGA
TACCGACCGGCTGAGGCAGATCAATTACGGCAATCTCGCCCTGCGGCGCGAGGCTCATCTGTTTCTGACTCACGGCGTGG
TCGTGGCTGTGTTGCTTCTGTCGATTTTCTGGCTTGTCAGCGCGAACTGGAATCGCGTGATGGGCATGTTCGGCGGCGGG
CACAACCAGCAGGCGGCGGTTCAGTGCTACGAGGTTGTCACCAACGTGACGCAGTTGCCGCCACCTCCGTCCATTGCGCC
GGAGCCGTCGAAGGTGAAGGCCGCCGCCGCGCCAGTGGAAGCGCCGAAGGTGGGCAAGATCAGGAAGGTGGCTGAAGCGC
CGCCGGATCAGACTTTCGCGACGCAGAAGGAGATCAAACAGGCGATCACGCAAGGCCCGGCTTCACAGGATGGCGGCGGT
TCGTCAGGCTCTTGTGACACGGTCGTGGAATTTGTCAACTGCCAGAATCCGCCGACGGTGGTCAGCACGCCGAGGCTGGT
CTATCCCGAAATGGCGAGGATCGCCGGTTTGGAAGGCAGGGTTTTCGTGCGCGTGCTCATCAGCGAAGAGGGCCGCCCGA
TGAAAGCCGAGATTGTCAAACGCATTCCTGCCGACCAGACAGTGTTCGACAAGGAGGCGGTGCGCATTGCTATGGAGACG
AAGTACACGGCGGGAGTGCAGAACGGCAGGAAGGTGCGGGTCTGGATGACTATTCCGGTGCGCTTTACGCTGCATGAATC
GTGA

Upstream 100 bases:

>100_bases
CCTCGACGATTTTACCCCGAAGGACGAAGCTGAAATTCAGAAGGCCGTGACCATGCGCTGAAGACGCGGTTCGTGAACCA
GAAAACAGGAGTACGGAAAG

Downstream 100 bases:

>100_bases
AGCGAATGATGAATTGAAGAGTGGCGGTTTGATTTGTCGGGGTCGCCCTGATTTGTTTCAAAAGTTATTGATACTCCAAA
GCCAACAGAAAGTCTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Like

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGG
HNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGG
SSGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET
KYTAGVQNGRKVRVWMTIPVRFTLHES

Sequences:

>Translated_267_residues
MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGG
HNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGG
SSGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET
KYTAGVQNGRKVRVWMTIPVRFTLHES
>Mature_266_residues
SSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGGH
NQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGS
SGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMETK
YTAGVQNGRKVRVWMTIPVRFTLHES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29493; Mature: 29362

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHEEHHHHHHHHHHHH
SIFWLVSANWNRVMGMFGGGHNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVE
HHHHHHCCCHHHEEHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
APKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGSSGSCDTVVEFVNCQNPPTV
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET
CCCCCHHCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEHH
KYTAGVQNGRKVRVWMTIPVRFTLHES
HHHHCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure 
SSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLL
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHEEHHHHHHHHHHHH
SIFWLVSANWNRVMGMFGGGHNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVE
HHHHHHCCCHHHEEHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
APKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGSSGSCDTVVEFVNCQNPPTV
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET
CCCCCHHCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEHH
KYTAGVQNGRKVRVWMTIPVRFTLHES
HHHHCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA