| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yjgQ [C]
Identifier: 21674368
GI number: 21674368
Start: 1457109
End: 1458263
Strand: Direct
Name: yjgQ [C]
Synonym: CT1549
Alternate gene names: 21674368
Gene position: 1457109-1458263 (Clockwise)
Preceding gene: 21674367
Following gene: 21674369
Centisome position: 67.62
GC content: 56.54
Gene sequence:
>1155_bases ATGAACGACGGCAAAGCGACACCGGGCGAGGCGGGCTGCCGGGAGAATCAACTCCTGAAGCTGCCTGGCTTCGGCAATTT CACGATCATCGATCGCTACATCGCCCGCCAGTTTCTGACGATCTTCCTGTTTGCCCTCGCGAGCTTCGCCGCGCTCTTTA TCCTGATCAATCTGGTCGAAAATCTCGACCGGTTTTTGGACCGGCACATTTCGTTCGGCAGGATTCTCATCTACTACCTT AGCGGCCTGCCGGACACCTTCCTTTTGACATCGCCTCTCAGCGTGTTGCTCGCATCACTCTTCGTCACCGGCAAGCTCTC GATGCAGAGTGAGCTGCCTGCACTGAAATCGGCGGGCATGAGCCTGTCGCGCCTGATGAAACCGTTTCTTTTGGTGACGA TGGCGATCGCGGCACTCAACACGATCAACTCTTGCTTCATCGCTCCGGCGATGTACGACTGGTCGAAAGGATTCGAAAAA CGCTACCTGAAAAAACAACAGGATAACGGCGAAGAACCGCTGCACATCCGGGAATCGAACAACCGAATCCTGACCGTTGC CAAGATCGGTCCCGACAAGAAAAGCGCGACGACCGTCTCGCTCGAAACGTTCAACGGAAGCCAGATCGTCTCGCGTATCG ACGCCGACTCGCTCCGGATCATCACCCGTCACAAGTACTGGATTTTCTACAACACGAAACAGCGCACCTTCTCGAAAGGC GCCGAAACCCTCGTGACCAGAGCGGGCGCGGACACCCTGAAGCTCTCGCTGGCACCCAATACGTTCAAGATGATCGACAC CGACCCGGACGAAATGAACATCGTGCAGCACATCGATTTCATCTGGCAAAAAGCGCGCTCGGGACTGCCAGGACTCGAAC GGGCGACGGTCAAGCTGCACACCAAGCTCGCCCTGCCGCTGGCCAGCATGATCATCGTGCTGATCGGCGTACCGCTCTCC TCGAAAAAAAAACGTAGCGGCCTGGCGGTGGAGATTTCCATCAGCCTGCTCATCGGGCTTCTCTATCTCGGTATGCTCAA AACAATCGGCAGCCTCGGCTACGACGGTCTGTTAAACCCGGTGCTCGCAGCGTGGCTGCCCGATATTCTCTTCATCATTG CCGGTACGTTTCTGTACCGCTCAGCCGACCACTGA
Upstream 100 bases:
>100_bases CGGCAAGAAAGAGCAACTCGATCTGGAGACACTTCGCAAATATGGCGACATCAGCTTCCTGACGCTCAGGGAGATTTTCG GCTACTGAGGGGCAAACCCG
Downstream 100 bases:
>100_bases CGCCCATGTTCCAGCCGCCGCTCATAGCGTTCCTGACCGATTTCGGCCTCGAAGACGCCTTCGTCGGCGTCATGAAAGGG GTGATCGCCACAATCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ Family; Permease Yjgp/Yjgq Family Protein; Permease YjgP/YjgQ; YjgP/YjgQ Family Permease; YjgP/YjgQ Family Protein; YjgP/YjgQ Permease
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNDGKATPGEAGCRENQLLKLPGFGNFTIIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDRHISFGRILIYYL SGLPDTFLLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFIAPAMYDWSKGFEK RYLKKQQDNGEEPLHIRESNNRILTVAKIGPDKKSATTVSLETFNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKG AETLVTRAGADTLKLSLAPNTFKMIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGVPLS SKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFLYRSADH
Sequences:
>Translated_384_residues MNDGKATPGEAGCRENQLLKLPGFGNFTIIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDRHISFGRILIYYL SGLPDTFLLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFIAPAMYDWSKGFEK RYLKKQQDNGEEPLHIRESNNRILTVAKIGPDKKSATTVSLETFNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKG AETLVTRAGADTLKLSLAPNTFKMIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGVPLS SKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFLYRSADH >Mature_384_residues MNDGKATPGEAGCRENQLLKLPGFGNFTIIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDRHISFGRILIYYL SGLPDTFLLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFIAPAMYDWSKGFEK RYLKKQQDNGEEPLHIRESNNRILTVAKIGPDKKSATTVSLETFNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKG AETLVTRAGADTLKLSLAPNTFKMIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGVPLS SKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFLYRSADH
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42620; Mature: 42620
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDGKATPGEAGCRENQLLKLPGFGNFTIIDRYIARQFLTIFLFALASFAALFILINLVE CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLDRFLDRHISFGRILIYYLSGLPDTFLLTSPLSVLLASLFVTGKLSMQSELPALKSAGM HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCC SLSRLMKPFLLVTMAIAALNTINSCFIAPAMYDWSKGFEKRYLKKQQDNGEEPLHIRESN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NRILTVAKIGPDKKSATTVSLETFNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKG CEEEEEEEECCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHH AETLVTRAGADTLKLSLAPNTFKMIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLH HHHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEH TKLALPLASMIIVLIGVPLSSKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNP HHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHH VLAAWLPDILFIIAGTFLYRSADH HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNDGKATPGEAGCRENQLLKLPGFGNFTIIDRYIARQFLTIFLFALASFAALFILINLVE CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLDRFLDRHISFGRILIYYLSGLPDTFLLTSPLSVLLASLFVTGKLSMQSELPALKSAGM HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCC SLSRLMKPFLLVTMAIAALNTINSCFIAPAMYDWSKGFEKRYLKKQQDNGEEPLHIRESN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NRILTVAKIGPDKKSATTVSLETFNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKG CEEEEEEEECCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEEEEEEECCCHHHHHHH AETLVTRAGADTLKLSLAPNTFKMIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLH HHHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEH TKLALPLASMIIVLIGVPLSSKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNP HHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHH VLAAWLPDILFIIAGTFLYRSADH HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA