| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674367
Identifier: 21674367
GI number: 21674367
Start: 1454229
End: 1457096
Strand: Direct
Name: 21674367
Synonym: CT1548
Alternate gene names: NA
Gene position: 1454229-1457096 (Clockwise)
Preceding gene: 21674363
Following gene: 21674368
Centisome position: 67.48
GC content: 58.37
Gene sequence:
>2868_bases ATGACAGAAACCAAGACGAACCAGAACGAAAGTTATCCATACACCACCGTCCCCGGCGACGCGCTTCAAACGCGGATTTA CACGCTGAAAAACGGCCTCACGGTCTATATGAGTCCCTACCACGACGAGCCGCGAATCTACACCTCCATCGCCGTGCGGG CGGGCAGCAAGAACGACCCCGCCGAGACCACCGGCCTGGCGCACTACCTCGAACACATGCTCTTCAAGGGCACCGATTCG ATCGGCTCGATCGACTACGCGAAAGAGCATACGGAGCTTGAAAAAATCATCGAGCTGTACGAACAGTACCGCGCCACGAG CGATCCGGAGCACCGCGCGGCGATCTACCGCGACATAGACAGCATCTCGAACGTGGCGGCGCAGTTCACCGTGCCGAACG AGTACGACAAACTGCTCAACTCCATCGGCGCGAAGGGCACCAACGCTTACACCTGGGTCGAGCAGACAGTCTACATCAAC GATATTCCATCCAACGAACTCGACCGCTGGCTGACCATTGAGGCCGAGCGCTTCCGCAATCCGGTGATGCGCCTCTTCCA CACCGAGCTGGAAACGGTCTACGAAGAGAAGAACATGACGATGGACAGCGACAGCCGCAAGCTCTGGGAGGAGCTGTTCA AGGGGCTGTTCACCAAGCACACCTACGGCACGCAGACCACCATCGGCAAGGCGGAGCACCTCAAGAAGCCGTCGATCAAG AACGTCATCGACTACTACCGCTCCTGGTACGTGCCGAACAACATGGCCCTCTGCATCGCGGGCGACTTCGATCCCGACGC GACGATCCGCCTGATCGACGAGAAGTTCTCGAAGCTCGAACCCAAGCCGGTGCCAGAGTTCCATCCGCCGGTCGAACCCG AGATCACCAGGCCGGTCGTCAAAACCGTCACCGGCCCGGAGGCGGAGGAGCTGGTGCTCGGCTTCCGCTTCGGCGGAGCA GATTCGGATGATGCCGACATGCTGACACTGATCGACAAGATTCTCTTCAACCAGACCGCAGGCCTGATCGACCTGAACCT CAACCAGCAGCAGAAGGTGCTCGAAGGCGGCTCGATGCTGGTACTGATGAAGGACTACTCGGTCCACATCCTCAGCGCCA AGCCGCGCGACGGCCAGAGCCTCGACGAGGTGAAGGCGCTCCTGCTCGAACAGCTCGATCTCGTCAAAAAAGGCGAGTTC CCCGACTGGCTGGTGACAGCGGTCATCAACGATCTCAAGCTCGAAGAGCTGAAAGCGTTCGAGTCGAACCGTGGCCGCTC GGAGGCATTCGTTGACACCTTCGTCTGGGGAATGGACTGGGCGCGGCAGGTCAACCGCTTCAAGCGGCTCGAAAAGATCA CGAAGGCAGAGATCGTCGAGTTCGCGAAACAGCACTACGCTCAGAACTACGTCGCCGTCTACAAAAAACACGGCCAGCGC AAAAGCGAGGCCAAAATCCAGAAGCCGCCAATCACGCCGATCAAAGTCAATCGCGACCGCTCGTCGGTGTTCGCCAAAAA CCTGCTCGCGAAAAAGAGCAGCAAGGTGCAACCCGTGTTCGTCGATTTCAAAAAGGACATCGGCTACTACGACATCACAC CGGAGATCAGCCTCAACTATGTGCCGAACCGGGAGAACGAGCTGTATAGCCTCTACTTCATGTTCGACGCGGGATCGAAC CTGAACCGCAAGATCGACACGGCGCTCGACTACCTGTCGTACCTCGGCACCTCACGCCTTTCGCCCGCGGAGTTCAGCCA GGAGCTGTATCGCCTCGGCGCACAGTTCACGGTGCAGACTTCAGATAATTACGTTTACCTCAAGCTCTCCGGCCTTAAGG AGAACTTCCCGCAGGCCATCTCTCTGCTCGACGAGCTGCTCCGTGACGCGCAGCCCGACGCTCCGGCGCTCGAAAAGCTC AAGGAGGGCATCCGCAAGGAGCGTGCTGACGAGAAGCTCTCAAAGCGTAAAATCCTCTTCGAGGCGATGGTCAATTACGG TAAATACGGCCCGAAGTCGCCCTTCACCAACGTCCTGAGTGACGAAGAGATCGACAAACTGACGCCTGAAGAGCTGCTTG GCGAAATCAAACACTTCATGAACTACCGCCACCGGGTGCTCTACTACGGCCCGGATTCGCCGGAAACGCTGATGACGGAA TTGCGCACCATGCACCACTTTGGTCAGTCGTTCCAGCCGGTGCCCGTGACCGATCCATTCGAGGAACTCAAGACCGCGAA AAACCACGTCTATGTGGTCGATTACGACATGACCCAGGCCGAAATCATCATGCTCTCGCGAGGCGCGGTATACGACGCCT CGAAGGTGCCGCTCGTCACACTCTTCAACGAATACTACGGTGGCGGCATGTCGTCGGTGGTCTTCCAGGAGATGCGCGAG GCCAAGGCGCTTGCCTACTCAGTCTTTTCGGTCTACCGCCTGCCGAAGGAGAAGGATCGCCACAGCTACGTGTTCAGCTA CATCGGCACGCAGGCAGACAAGCTGCCCGAGGCGCTCGACGGATTCAACGAGCTGATGCAGAAGCTGCCCGAATCGCCAG AGCTGTTCGCCTCGGCCAAGGCGGGTATCGACCAGAAGATCCGCACCGAGCGAATCACCAAGGGAGATGTACTCTTCGCC CTCGAAGAGGCGCGACGCCTCGGCCTCGACCACGACATCCGGCAGGATGTGTTCCGCGAAGTGCCCGGCATGAGTTTCAG CGACATCGAGCAGTTCCACGAAACGCGCTTCCGTAACAAGCCACAGATCATGCTGGTGCTCGGCAAGAAAGAGCAACTCG ATCTGGAGACACTTCGCAAATATGGCGACATCAGCTTCCTGACGCTCAGGGAGATTTTCGGCTACTGA
Upstream 100 bases:
>100_bases ACGATGAAGAACTATGTCCAACGGCTCATTACTGAAATCAACGGGCAGAGTGCTCGCCTTCTGGCTGGCGCTGCTCCATC TCATATCCTGTAGATCAACC
Downstream 100 bases:
>100_bases GGGGCAAACCCGATGAACGACGGCAAAGCGACACCGGGCGAGGCGGGCTGCCGGGAGAATCAACTCCTGAAGCTGCCTGG CTTCGGCAATTTCACGATCA
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 955; Mature: 954
Protein sequence:
>955_residues MTETKTNQNESYPYTTVPGDALQTRIYTLKNGLTVYMSPYHDEPRIYTSIAVRAGSKNDPAETTGLAHYLEHMLFKGTDS IGSIDYAKEHTELEKIIELYEQYRATSDPEHRAAIYRDIDSISNVAAQFTVPNEYDKLLNSIGAKGTNAYTWVEQTVYIN DIPSNELDRWLTIEAERFRNPVMRLFHTELETVYEEKNMTMDSDSRKLWEELFKGLFTKHTYGTQTTIGKAEHLKKPSIK NVIDYYRSWYVPNNMALCIAGDFDPDATIRLIDEKFSKLEPKPVPEFHPPVEPEITRPVVKTVTGPEAEELVLGFRFGGA DSDDADMLTLIDKILFNQTAGLIDLNLNQQQKVLEGGSMLVLMKDYSVHILSAKPRDGQSLDEVKALLLEQLDLVKKGEF PDWLVTAVINDLKLEELKAFESNRGRSEAFVDTFVWGMDWARQVNRFKRLEKITKAEIVEFAKQHYAQNYVAVYKKHGQR KSEAKIQKPPITPIKVNRDRSSVFAKNLLAKKSSKVQPVFVDFKKDIGYYDITPEISLNYVPNRENELYSLYFMFDAGSN LNRKIDTALDYLSYLGTSRLSPAEFSQELYRLGAQFTVQTSDNYVYLKLSGLKENFPQAISLLDELLRDAQPDAPALEKL KEGIRKERADEKLSKRKILFEAMVNYGKYGPKSPFTNVLSDEEIDKLTPEELLGEIKHFMNYRHRVLYYGPDSPETLMTE LRTMHHFGQSFQPVPVTDPFEELKTAKNHVYVVDYDMTQAEIIMLSRGAVYDASKVPLVTLFNEYYGGGMSSVVFQEMRE AKALAYSVFSVYRLPKEKDRHSYVFSYIGTQADKLPEALDGFNELMQKLPESPELFASAKAGIDQKIRTERITKGDVLFA LEEARRLGLDHDIRQDVFREVPGMSFSDIEQFHETRFRNKPQIMLVLGKKEQLDLETLRKYGDISFLTLREIFGY
Sequences:
>Translated_955_residues MTETKTNQNESYPYTTVPGDALQTRIYTLKNGLTVYMSPYHDEPRIYTSIAVRAGSKNDPAETTGLAHYLEHMLFKGTDS IGSIDYAKEHTELEKIIELYEQYRATSDPEHRAAIYRDIDSISNVAAQFTVPNEYDKLLNSIGAKGTNAYTWVEQTVYIN DIPSNELDRWLTIEAERFRNPVMRLFHTELETVYEEKNMTMDSDSRKLWEELFKGLFTKHTYGTQTTIGKAEHLKKPSIK NVIDYYRSWYVPNNMALCIAGDFDPDATIRLIDEKFSKLEPKPVPEFHPPVEPEITRPVVKTVTGPEAEELVLGFRFGGA DSDDADMLTLIDKILFNQTAGLIDLNLNQQQKVLEGGSMLVLMKDYSVHILSAKPRDGQSLDEVKALLLEQLDLVKKGEF PDWLVTAVINDLKLEELKAFESNRGRSEAFVDTFVWGMDWARQVNRFKRLEKITKAEIVEFAKQHYAQNYVAVYKKHGQR KSEAKIQKPPITPIKVNRDRSSVFAKNLLAKKSSKVQPVFVDFKKDIGYYDITPEISLNYVPNRENELYSLYFMFDAGSN LNRKIDTALDYLSYLGTSRLSPAEFSQELYRLGAQFTVQTSDNYVYLKLSGLKENFPQAISLLDELLRDAQPDAPALEKL KEGIRKERADEKLSKRKILFEAMVNYGKYGPKSPFTNVLSDEEIDKLTPEELLGEIKHFMNYRHRVLYYGPDSPETLMTE LRTMHHFGQSFQPVPVTDPFEELKTAKNHVYVVDYDMTQAEIIMLSRGAVYDASKVPLVTLFNEYYGGGMSSVVFQEMRE AKALAYSVFSVYRLPKEKDRHSYVFSYIGTQADKLPEALDGFNELMQKLPESPELFASAKAGIDQKIRTERITKGDVLFA LEEARRLGLDHDIRQDVFREVPGMSFSDIEQFHETRFRNKPQIMLVLGKKEQLDLETLRKYGDISFLTLREIFGY >Mature_954_residues TETKTNQNESYPYTTVPGDALQTRIYTLKNGLTVYMSPYHDEPRIYTSIAVRAGSKNDPAETTGLAHYLEHMLFKGTDSI GSIDYAKEHTELEKIIELYEQYRATSDPEHRAAIYRDIDSISNVAAQFTVPNEYDKLLNSIGAKGTNAYTWVEQTVYIND IPSNELDRWLTIEAERFRNPVMRLFHTELETVYEEKNMTMDSDSRKLWEELFKGLFTKHTYGTQTTIGKAEHLKKPSIKN VIDYYRSWYVPNNMALCIAGDFDPDATIRLIDEKFSKLEPKPVPEFHPPVEPEITRPVVKTVTGPEAEELVLGFRFGGAD SDDADMLTLIDKILFNQTAGLIDLNLNQQQKVLEGGSMLVLMKDYSVHILSAKPRDGQSLDEVKALLLEQLDLVKKGEFP DWLVTAVINDLKLEELKAFESNRGRSEAFVDTFVWGMDWARQVNRFKRLEKITKAEIVEFAKQHYAQNYVAVYKKHGQRK SEAKIQKPPITPIKVNRDRSSVFAKNLLAKKSSKVQPVFVDFKKDIGYYDITPEISLNYVPNRENELYSLYFMFDAGSNL NRKIDTALDYLSYLGTSRLSPAEFSQELYRLGAQFTVQTSDNYVYLKLSGLKENFPQAISLLDELLRDAQPDAPALEKLK EGIRKERADEKLSKRKILFEAMVNYGKYGPKSPFTNVLSDEEIDKLTPEELLGEIKHFMNYRHRVLYYGPDSPETLMTEL RTMHHFGQSFQPVPVTDPFEELKTAKNHVYVVDYDMTQAEIIMLSRGAVYDASKVPLVTLFNEYYGGGMSSVVFQEMREA KALAYSVFSVYRLPKEKDRHSYVFSYIGTQADKLPEALDGFNELMQKLPESPELFASAKAGIDQKIRTERITKGDVLFAL EEARRLGLDHDIRQDVFREVPGMSFSDIEQFHETRFRNKPQIMLVLGKKEQLDLETLRKYGDISFLTLREIFGY
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 109750; Mature: 109619
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETKTNQNESYPYTTVPGDALQTRIYTLKNGLTVYMSPYHDEPRIYTSIAVRAGSKNDP CCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCC AETTGLAHYLEHMLFKGTDSIGSIDYAKEHTELEKIIELYEQYRATSDPEHRAAIYRDID HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SISNVAAQFTVPNEYDKLLNSIGAKGTNAYTWVEQTVYINDIPSNELDRWLTIEAERFRN HHHHHHHEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEHHHHHH PVMRLFHTELETVYEEKNMTMDSDSRKLWEELFKGLFTKHTYGTQTTIGKAEHLKKPSIK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHH NVIDYYRSWYVPNNMALCIAGDFDPDATIRLIDEKFSKLEPKPVPEFHPPVEPEITRPVV HHHHHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHH KTVTGPEAEELVLGFRFGGADSDDADMLTLIDKILFNQTAGLIDLNLNQQQKVLEGGSML HHCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCEE VLMKDYSVHILSAKPRDGQSLDEVKALLLEQLDLVKKGEFPDWLVTAVINDLKLEELKAF EEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ESNRGRSEAFVDTFVWGMDWARQVNRFKRLEKITKAEIVEFAKQHYAQNYVAVYKKHGQR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSEAKIQKPPITPIKVNRDRSSVFAKNLLAKKSSKVQPVFVDFKKDIGYYDITPEISLNY CHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCCCCEEEE VPNRENELYSLYFMFDAGSNLNRKIDTALDYLSYLGTSRLSPAEFSQELYRLGAQFTVQT CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE SDNYVYLKLSGLKENFPQAISLLDELLRDAQPDAPALEKLKEGIRKERADEKLSKRKILF CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAMVNYGKYGPKSPFTNVLSDEEIDKLTPEELLGEIKHFMNYRHRVLYYGPDSPETLMTE HHHHHHCCCCCCCCHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LRTMHHFGQSFQPVPVTDPFEELKTAKNHVYVVDYDMTQAEIIMLSRGAVYDASKVPLVT HHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHH LFNEYYGGGMSSVVFQEMREAKALAYSVFSVYRLPKEKDRHSYVFSYIGTQADKLPEALD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH GFNELMQKLPESPELFASAKAGIDQKIRTERITKGDVLFALEEARRLGLDHDIRQDVFRE HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHH VPGMSFSDIEQFHETRFRNKPQIMLVLGKKEQLDLETLRKYGDISFLTLREIFGY CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure TETKTNQNESYPYTTVPGDALQTRIYTLKNGLTVYMSPYHDEPRIYTSIAVRAGSKNDP CCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCC AETTGLAHYLEHMLFKGTDSIGSIDYAKEHTELEKIIELYEQYRATSDPEHRAAIYRDID HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SISNVAAQFTVPNEYDKLLNSIGAKGTNAYTWVEQTVYINDIPSNELDRWLTIEAERFRN HHHHHHHEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEHHHHHH PVMRLFHTELETVYEEKNMTMDSDSRKLWEELFKGLFTKHTYGTQTTIGKAEHLKKPSIK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHH NVIDYYRSWYVPNNMALCIAGDFDPDATIRLIDEKFSKLEPKPVPEFHPPVEPEITRPVV HHHHHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHH KTVTGPEAEELVLGFRFGGADSDDADMLTLIDKILFNQTAGLIDLNLNQQQKVLEGGSML HHCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCEE VLMKDYSVHILSAKPRDGQSLDEVKALLLEQLDLVKKGEFPDWLVTAVINDLKLEELKAF EEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ESNRGRSEAFVDTFVWGMDWARQVNRFKRLEKITKAEIVEFAKQHYAQNYVAVYKKHGQR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSEAKIQKPPITPIKVNRDRSSVFAKNLLAKKSSKVQPVFVDFKKDIGYYDITPEISLNY CHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCCCCEEEE VPNRENELYSLYFMFDAGSNLNRKIDTALDYLSYLGTSRLSPAEFSQELYRLGAQFTVQT CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE SDNYVYLKLSGLKENFPQAISLLDELLRDAQPDAPALEKLKEGIRKERADEKLSKRKILF CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAMVNYGKYGPKSPFTNVLSDEEIDKLTPEELLGEIKHFMNYRHRVLYYGPDSPETLMTE HHHHHHCCCCCCCCHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LRTMHHFGQSFQPVPVTDPFEELKTAKNHVYVVDYDMTQAEIIMLSRGAVYDASKVPLVT HHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHH LFNEYYGGGMSSVVFQEMREAKALAYSVFSVYRLPKEKDRHSYVFSYIGTQADKLPEALD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH GFNELMQKLPESPELFASAKAGIDQKIRTERITKGDVLFALEEARRLGLDHDIRQDVFRE HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHH VPGMSFSDIEQFHETRFRNKPQIMLVLGKKEQLDLETLRKYGDISFLTLREIFGY CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]