| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674316
Identifier: 21674316
GI number: 21674316
Start: 1400250
End: 1401029
Strand: Direct
Name: 21674316
Synonym: CT1496
Alternate gene names: NA
Gene position: 1400250-1401029 (Clockwise)
Preceding gene: 21674314
Following gene: 21674317
Centisome position: 64.98
GC content: 54.87
Gene sequence:
>780_bases GTGCAACGAATCTCTCACCGACCCATGTTCACGATACGTAATTCTCTATTCATTTTTCTCTGCGTGATGGCTGGTATGAG CTTGCCATGCCAGCAACCCGCGGCAATGGCGGCCAAGATCTCATATGCTTCCGAAATCGTGAAAGATGTGAGAGAAGATA AGGTTTATTTACTGGAAAAAATCCGCAAGCAACTCACAAAGCCTTCAGAAAAGATTCTCGTCGAGGCACTCCTGACCGAA GATGGCCCGAAAGCAGCGAAACTTTACCGAAAACAGCTTGAGGAACATCCCGATCCTCAACTCGACCCGATAAGCAGCTC ACGTCTGGCTGCTTATGAGTTTGCCGTATCGACTACCCCCGGCCTGCCAGTCATGCAGGCCAGAGCTTCTTCAGAGTCCC GCCCTGCATTGATGACCATCGCCCAACCTCTTCAGCCAAAACAGCCTGTCAGTAAGCCCGATTCTTCACTCAAACGCACG CCGCCGCCAGCTGGCCCTGCCCATGCTGCAAGCAAAGGTGACACCGTCAGCACCAGGCTGGCGCCACCTCCTGCGCAGGC TTCGGGGGGAGGTTTCACGCTTCAGTTCGGTAGCTTTGACAGCATCACCAATGCCGAGCAGATGGTCGCACAGCTGCAAT ACACCGCCCCGGCCCGGGTGCAGCAAATCAACGGAGTCTACAAAGTGCGCTTGAGACGCACATTCACGACCCAGCAGGAG GCAGCAGCTTTCGCGCGTACGCTTCCGATCGAATCAATCGTCGTACCACCGCAACCATGA
Upstream 100 bases:
>100_bases TGACCGAAAAGTGCTTCATGGAGCAATTGATTTTATCGTAAAATATTTCCCATATTCACTCTAAGACCCTGCCGCAGGGA TCCTCCGGCTGGCTGAAACT
Downstream 100 bases:
>100_bases CCATGATACCGATCAAGCAACCATGAGCCGCAGCATCGAATTCATCGGACGCTCGGCGGGCATCGTCCAGCTCAGGGAGC TGGCCATGCAGGTCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation Domain Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MQRISHRPMFTIRNSLFIFLCVMAGMSLPCQQPAAMAAKISYASEIVKDVREDKVYLLEKIRKQLTKPSEKILVEALLTE DGPKAAKLYRKQLEEHPDPQLDPISSSRLAAYEFAVSTTPGLPVMQARASSESRPALMTIAQPLQPKQPVSKPDSSLKRT PPPAGPAHAASKGDTVSTRLAPPPAQASGGGFTLQFGSFDSITNAEQMVAQLQYTAPARVQQINGVYKVRLRRTFTTQQE AAAFARTLPIESIVVPPQP
Sequences:
>Translated_259_residues MQRISHRPMFTIRNSLFIFLCVMAGMSLPCQQPAAMAAKISYASEIVKDVREDKVYLLEKIRKQLTKPSEKILVEALLTE DGPKAAKLYRKQLEEHPDPQLDPISSSRLAAYEFAVSTTPGLPVMQARASSESRPALMTIAQPLQPKQPVSKPDSSLKRT PPPAGPAHAASKGDTVSTRLAPPPAQASGGGFTLQFGSFDSITNAEQMVAQLQYTAPARVQQINGVYKVRLRRTFTTQQE AAAFARTLPIESIVVPPQP >Mature_259_residues MQRISHRPMFTIRNSLFIFLCVMAGMSLPCQQPAAMAAKISYASEIVKDVREDKVYLLEKIRKQLTKPSEKILVEALLTE DGPKAAKLYRKQLEEHPDPQLDPISSSRLAAYEFAVSTTPGLPVMQARASSESRPALMTIAQPLQPKQPVSKPDSSLKRT PPPAGPAHAASKGDTVSTRLAPPPAQASGGGFTLQFGSFDSITNAEQMVAQLQYTAPARVQQINGVYKVRLRRTFTTQQE AAAFARTLPIESIVVPPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28292; Mature: 28292
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRISHRPMFTIRNSLFIFLCVMAGMSLPCQQPAAMAAKISYASEIVKDVREDKVYLLEK CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRKQLTKPSEKILVEALLTEDGPKAAKLYRKQLEEHPDPQLDPISSSRLAAYEFAVSTTP HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GLPVMQARASSESRPALMTIAQPLQPKQPVSKPDSSLKRTPPPAGPAHAASKGDTVSTRL CCCHHHHHCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC APPPAQASGGGFTLQFGSFDSITNAEQMVAQLQYTAPARVQQINGVYKVRLRRTFTTQQE CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHCCHHH AAAFARTLPIESIVVPPQP HHHHHHHCCCCEEECCCCC >Mature Secondary Structure MQRISHRPMFTIRNSLFIFLCVMAGMSLPCQQPAAMAAKISYASEIVKDVREDKVYLLEK CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRKQLTKPSEKILVEALLTEDGPKAAKLYRKQLEEHPDPQLDPISSSRLAAYEFAVSTTP HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GLPVMQARASSESRPALMTIAQPLQPKQPVSKPDSSLKRTPPPAGPAHAASKGDTVSTRL CCCHHHHHCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC APPPAQASGGGFTLQFGSFDSITNAEQMVAQLQYTAPARVQQINGVYKVRLRRTFTTQQE CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHCCHHH AAAFARTLPIESIVVPPQP HHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA