| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is fur [H]
Identifier: 21674276
GI number: 21674276
Start: 1366130
End: 1366621
Strand: Direct
Name: fur [H]
Synonym: CT1455
Alternate gene names: 21674276
Gene position: 1366130-1366621 (Clockwise)
Preceding gene: 21674270
Following gene: 21674277
Centisome position: 63.4
GC content: 57.52
Gene sequence:
>492_bases GTGAAACAAACGGGCAGCGACACGATCGCAAAGGTCGAAGCGCTTTTCAAATCGTACATGAAGGAGGAGGGGCTCCGCTG CACCCAGGAGCGCCTGAGCGTGCTCAGAGAGATGTATGGCTCCAGCACCCACCTTGACGCCGACGAGCTCTTTGTCCGGC TGCGTAAAAAAGGAGTTGCCATTTCACGCGCCACGGTGTACCACACCCTTGACCTGCTCTTCAGGTTCAACCTCGTCACC AAGATCGATCTCGGCCATAAGCACACCCACTACGAAAAATCCTGGGGCGTGACCAACCACCTGCACATCATCTGTCTGAA ATGCGGACACGTTTCGGAGGCCACGAGCTGCGAGCTGCCGGAATTGATGGAAACGCTCTGCGTCGGGCACGGCTACTCGC TCGGCAGTTTCAGCCTGCAACTCTTTGGCGAGTGCGCAGACAAGGAGGCCTGCGCCCGGCGCATCAGCAACAAGCACAAA GAGAAAACCTGA
Upstream 100 bases:
>100_bases GGCTCTTCCCGCTCCGCCGCCTTCATGGTTCACAGGGAATTCGCAGAAAAACAATACATTAGAAAAACCGAAAACACAAA ATACTGACAGCAAGAACATC
Downstream 100 bases:
>100_bases AATCCGGACACCATGCCCTGGCTCTATCTGATCCTCGCCATCATCGCCGAAGTCTCCGGCACCACCAGCATGAAGCTCTC GGCAGGCTTCACCAAGCCGG
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREMYGSSTHLDADELFVRLRKKGVAISRATVYHTLDLLFRFNLVT KIDLGHKHTHYEKSWGVTNHLHIICLKCGHVSEATSCELPELMETLCVGHGYSLGSFSLQLFGECADKEACARRISNKHK EKT
Sequences:
>Translated_163_residues MKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREMYGSSTHLDADELFVRLRKKGVAISRATVYHTLDLLFRFNLVT KIDLGHKHTHYEKSWGVTNHLHIICLKCGHVSEATSCELPELMETLCVGHGYSLGSFSLQLFGECADKEACARRISNKHK EKT >Mature_163_residues MKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREMYGSSTHLDADELFVRLRKKGVAISRATVYHTLDLLFRFNLVT KIDLGHKHTHYEKSWGVTNHLHIICLKCGHVSEATSCELPELMETLCVGHGYSLGSFSLQLFGECADKEACARRISNKHK EKT
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18491; Mature: 18491
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREMYGSSTHLDADELFVRLRKKGVA CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCH ISRATVYHTLDLLFRFNLVTKIDLGHKHTHYEKSWGVTNHLHIICLKCGHVSEATSCELP HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHH ELMETLCVGHGYSLGSFSLQLFGECADKEACARRISNKHKEKT HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREMYGSSTHLDADELFVRLRKKGVA CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCH ISRATVYHTLDLLFRFNLVTKIDLGHKHTHYEKSWGVTNHLHIICLKCGHVSEATSCELP HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHH ELMETLCVGHGYSLGSFSLQLFGECADKEACARRISNKHKEKT HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]