| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674246
Identifier: 21674246
GI number: 21674246
Start: 1337588
End: 1338433
Strand: Direct
Name: 21674246
Synonym: CT1425
Alternate gene names: NA
Gene position: 1337588-1338433 (Clockwise)
Preceding gene: 21674244
Following gene: 21674247
Centisome position: 62.07
GC content: 54.85
Gene sequence:
>846_bases ATGGCTAATATATTTATCGAAAACAGCTTGCTTTTTGCCCTGACACAGATTGTGCCGCTATTGTACATCGTCACCACCGC CCTGTACGGCATCCACTTTTTCAAGGAGACGCCGCTGGCCGGAAGCCTCAAGCAGCCCGCGCTCATCCTTACCGTGGTCA CGCATGTGGCCGATCTCGGTCTGCTCACCTCGACGGCAGGATACCGGCTGAGTTATTCGGCCTACAACCTCATGAGCATG GTGGCGCTGACGCTCGCCATTACGTACATGTTCATCGAATTCACCACAAAAAGCGACAAGACCGGCTTTTTCGTCATCGC CTTCGCGGCGGGATCGGCTCTCTTTTCATCAATCCTGAGCTCCCAAACCGTCGATTCCGGACTTGCATTCAGCGGTCTGG GCATTGGTGTTCACCTGTTCGCGGCCATCTTTGGCTTCAGCTCGGTAGCCATCGCCGGGCTGTACAGCGGCATGTATCTG GTGCTTTTCCGCCAGATCCGGCTCAACCGGTTCGGCCTGCTCTTTCAGCGCCTGCCAAACCTGGAGACGCTGGAAATGCT GATCATGCACGCCGTGGCTTTCGGCTTCTTTTTCCTGTCGGTCACCATCGTGGCTGGCGTTCTCGAACAGCACGCATCAA AAGAAGTCATTAACCTTTTCGAGCCTCGGCTCGTCTCCCTGTTTGTCATCTGGGCGCTCTATGGCATCAGCCTGGTCATC AAACCGCTGTTTGGCTGGGACATCAAGCACATGGCGGTGCTGCTCATCGCACTGTTCGTCCTGGTCACCGCGCTGTTGTT CATCATGAGTCTGGTTACGCCAAGTTTTCACGGAATGAGTATTTAA
Upstream 100 bases:
>100_bases TTTCAGTTTTATTGAGTGAAACGGGCTCGCGTCAGACACAATAATAACTGAAGTATTGTCACGATAATCCTGTCCTCGAA ACGACCTCTTCCCACAGAGT
Downstream 100 bases:
>100_bases CCGAAGCGCCATTTGAAAATTCGGCACATTGCGGTATATTAATACACTTTTGGAGATTCCTTTTCCAAGCTCTTTTGAAC GGGTTACGAACGGCTCATCA
Product: HemX protein, putative
Products: NA
Alternate protein names: HemX Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MANIFIENSLLFALTQIVPLLYIVTTALYGIHFFKETPLAGSLKQPALILTVVTHVADLGLLTSTAGYRLSYSAYNLMSM VALTLAITYMFIEFTTKSDKTGFFVIAFAAGSALFSSILSSQTVDSGLAFSGLGIGVHLFAAIFGFSSVAIAGLYSGMYL VLFRQIRLNRFGLLFQRLPNLETLEMLIMHAVAFGFFFLSVTIVAGVLEQHASKEVINLFEPRLVSLFVIWALYGISLVI KPLFGWDIKHMAVLLIALFVLVTALLFIMSLVTPSFHGMSI
Sequences:
>Translated_281_residues MANIFIENSLLFALTQIVPLLYIVTTALYGIHFFKETPLAGSLKQPALILTVVTHVADLGLLTSTAGYRLSYSAYNLMSM VALTLAITYMFIEFTTKSDKTGFFVIAFAAGSALFSSILSSQTVDSGLAFSGLGIGVHLFAAIFGFSSVAIAGLYSGMYL VLFRQIRLNRFGLLFQRLPNLETLEMLIMHAVAFGFFFLSVTIVAGVLEQHASKEVINLFEPRLVSLFVIWALYGISLVI KPLFGWDIKHMAVLLIALFVLVTALLFIMSLVTPSFHGMSI >Mature_280_residues ANIFIENSLLFALTQIVPLLYIVTTALYGIHFFKETPLAGSLKQPALILTVVTHVADLGLLTSTAGYRLSYSAYNLMSMV ALTLAITYMFIEFTTKSDKTGFFVIAFAAGSALFSSILSSQTVDSGLAFSGLGIGVHLFAAIFGFSSVAIAGLYSGMYLV LFRQIRLNRFGLLFQRLPNLETLEMLIMHAVAFGFFFLSVTIVAGVLEQHASKEVINLFEPRLVSLFVIWALYGISLVIK PLFGWDIKHMAVLLIALFVLVTALLFIMSLVTPSFHGMSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30793; Mature: 30662
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIFIENSLLFALTQIVPLLYIVTTALYGIHFFKETPLAGSLKQPALILTVVTHVADLG CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LLTSTAGYRLSYSAYNLMSMVALTLAITYMFIEFTTKSDKTGFFVIAFAAGSALFSSILS HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHH SQTVDSGLAFSGLGIGVHLFAAIFGFSSVAIAGLYSGMYLVLFRQIRLNRFGLLFQRLPN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LETLEMLIMHAVAFGFFFLSVTIVAGVLEQHASKEVINLFEPRLVSLFVIWALYGISLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPLFGWDIKHMAVLLIALFVLVTALLFIMSLVTPSFHGMSI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ANIFIENSLLFALTQIVPLLYIVTTALYGIHFFKETPLAGSLKQPALILTVVTHVADLG CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LLTSTAGYRLSYSAYNLMSMVALTLAITYMFIEFTTKSDKTGFFVIAFAAGSALFSSILS HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHH SQTVDSGLAFSGLGIGVHLFAAIFGFSSVAIAGLYSGMYLVLFRQIRLNRFGLLFQRLPN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LETLEMLIMHAVAFGFFFLSVTIVAGVLEQHASKEVINLFEPRLVSLFVIWALYGISLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPLFGWDIKHMAVLLIALFVLVTALLFIMSLVTPSFHGMSI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA