Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ypjG [H]

Identifier: 21674240

GI number: 21674240

Start: 1329752

End: 1330504

Strand: Direct

Name: ypjG [H]

Synonym: CT1419

Alternate gene names: 21674240

Gene position: 1329752-1330504 (Clockwise)

Preceding gene: 21674238

Following gene: 21674241

Centisome position: 61.71

GC content: 61.49

Gene sequence:

>753_bases
ATGACCTTGACTGCACCCATCCAACCGGTTTACGCACTCGCTTTCGGCGCTCATCCCGACGATGTCGAACTCGCCTGTGG
AGCGACGCTCCTGAAAATCATGGACGAGGGAAAGCCGGTGGCCGTCTGCGACCTCACCGCTGGGGAGATGGGCACGCTCG
GCACCGCCGAAACCCGCCGTCAGGAGGCCGCGCTGGCCACCGAGCGCATGGGTTACGTGGCGCGAGAGCAGCTCGATCTC
GGCGATTCGGAGCTGTTCTATACTAAAGAGAGCCTGCACAAGATCATCCGGATCATCCGCAAATACCGGCCCGACACGGT
TTTCTGCAACCCGCCGGACGAACGCCATCCCGACCACATGAAAGCCTCGCGCCTCATCTACGAGGCCTGCTACTACGCCG
GGCTGCGCAAAATCGAAACCTTTGATGGTGGCCTGCCACAAGCCGCACACCGTCCGCGCCACCTGCTCTATTACATCCAG
TTCAAGCAGCTCGAACCGCAGATCGTCGTGGACGTTTCATCGACCTTCGAGCGTTCGCGAGCCGGTATAGAAGCGTTCGG
AACGCAATTCCACCGCAAGGAGAACAGCGACGAGCCAGTCACGATGATCAACCGAAAGGAGTTCCTGCCGGGCCTCGAAG
CGCGCTCGAGGGCACTCGGCGAGCAGATCGGCGTCATGTACGGCGAGGGGTTCCGCCTGCCGACGGCACTCGGCATCGAT
CACTTCACGAGCGTTTTTCCGCCCGGCGTTTGA

Upstream 100 bases:

>100_bases
TTGATTGAGTCGAACTATTTTTACCTTGATCATCGAGTGTATCTTTTTTTACCTGATAGCCTTCGTGGGCTGAAAACCGC
GTCGCTTAATATATAAAATC

Downstream 100 bases:

>100_bases
CGGCGGGCCAACCCATCAATAGAATTTCAGACCTGACCGCCATGCACAAATCATTGCTGAGCATCGCCGCTCTTTTGCTA
GTGACGCTGTTCGCGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTLTAPIQPVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRRQEAALATERMGYVAREQLDL
GDSELFYTKESLHKIIRIIRKYRPDTVFCNPPDERHPDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQ
FKQLEPQIVVDVSSTFERSRAGIEAFGTQFHRKENSDEPVTMINRKEFLPGLEARSRALGEQIGVMYGEGFRLPTALGID
HFTSVFPPGV

Sequences:

>Translated_250_residues
MTLTAPIQPVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRRQEAALATERMGYVAREQLDL
GDSELFYTKESLHKIIRIIRKYRPDTVFCNPPDERHPDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQ
FKQLEPQIVVDVSSTFERSRAGIEAFGTQFHRKENSDEPVTMINRKEFLPGLEARSRALGEQIGVMYGEGFRLPTALGID
HFTSVFPPGV
>Mature_249_residues
TLTAPIQPVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRRQEAALATERMGYVAREQLDLG
DSELFYTKESLHKIIRIIRKYRPDTVFCNPPDERHPDHMKASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQF
KQLEPQIVVDVSSTFERSRAGIEAFGTQFHRKENSDEPVTMINRKEFLPGLEARSRALGEQIGVMYGEGFRLPTALGIDH
FTSVFPPGV

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 28003; Mature: 27872

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTAPIQPVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRR
CCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
QEAALATERMGYVAREQLDLGDSELFYTKESLHKIIRIIRKYRPDTVFCNPPDERHPDHM
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
KASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQFKQLEPQIVVDVSSTFERSR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCEEEEECHHHHHHHH
AGIEAFGTQFHRKENSDEPVTMINRKEFLPGLEARSRALGEQIGVMYGEGFRLPTALGID
CCHHHHHHHHHHCCCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHCHH
HFTSVFPPGV
HHHHHCCCCC
>Mature Secondary Structure 
TLTAPIQPVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRR
CCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
QEAALATERMGYVAREQLDLGDSELFYTKESLHKIIRIIRKYRPDTVFCNPPDERHPDHM
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
KASRLIYEACYYAGLRKIETFDGGLPQAAHRPRHLLYYIQFKQLEPQIVVDVSSTFERSR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCEEEEECHHHHHHHH
AGIEAFGTQFHRKENSDEPVTMINRKEFLPGLEARSRALGEQIGVMYGEGFRLPTALGID
CCHHHHHHHHHHCCCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHCHH
HFTSVFPPGV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]