Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674236

Identifier: 21674236

GI number: 21674236

Start: 1327023

End: 1327631

Strand: Direct

Name: 21674236

Synonym: CT1415

Alternate gene names: NA

Gene position: 1327023-1327631 (Clockwise)

Preceding gene: 21674235

Following gene: 21674237

Centisome position: 61.58

GC content: 61.41

Gene sequence:

>609_bases
ATGAAAAGCCGGAATGACGAACTCCTGATCATCTTCTCGAAAAATCCCGTTGCCGGGCGAGTCAAAACCCGCCTGGCCTC
GGCAATCGGCGACGCCGAAGCACTGCGGATTTACGAGCAGCTTCGGGAGTTAACCAAGCAGGCGACAACAGGCATCAACG
CATCGAAAGCCATCGCCTACTCGGACTTCATCCCCAACACTGACCTCTTGCTTGCCCCCGACACGGAAGCGTGGCTCCAG
CAAGGCAGCGACCTCGGCGAACGGATGCACCGCGCTTTCGTGAAAGGCTTTTCGCTCGGCTTCAGCCGCGTCGCGCTCAT
CGGCACCGACTGCCCGGAACTCAGCCCGTTCATTCTCGATCTCGCGTTCCGGAAACTCGACGCCTGCGACGTGGTGCTCG
GCCCCGCGCGGGACGGCGGATTTTATCTCGCCGCCCTGAAGCAACCCTTCCCGGAGCTTTTTCTCGGCAGAACCTGGAGC
ACATCGAGCGTGCTGAACGACTCTCAGCGCATCATCCGCGAGCACGGCAGATCGTGCGACCTGCTCCCGGCGCTCTCCGA
CATCGACACCTTCGACGACCTCAGAGCGAGCGGCTTATGGACACCGTGA

Upstream 100 bases:

>100_bases
GCCCTTCCCATGCGATGGTGTCGCGATGTGCCTTGAAAGCAGGGCGAACACATAGGTTCGTTCCTACAACCGAAATTGAC
AACCTCCCGGAGAGCCTCGC

Downstream 100 bases:

>100_bases
CAAAGCTGAGCATCATCATTCCGGCATGGAACGAGGAGACCGGAATCGCCCGCACACTCGAAACGCTGCTCGCCCTGACG
GCTGGACGCGGCGACACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKSRNDELLIIFSKNPVAGRVKTRLASAIGDAEALRIYEQLRELTKQATTGINASKAIAYSDFIPNTDLLLAPDTEAWLQ
QGSDLGERMHRAFVKGFSLGFSRVALIGTDCPELSPFILDLAFRKLDACDVVLGPARDGGFYLAALKQPFPELFLGRTWS
TSSVLNDSQRIIREHGRSCDLLPALSDIDTFDDLRASGLWTP

Sequences:

>Translated_202_residues
MKSRNDELLIIFSKNPVAGRVKTRLASAIGDAEALRIYEQLRELTKQATTGINASKAIAYSDFIPNTDLLLAPDTEAWLQ
QGSDLGERMHRAFVKGFSLGFSRVALIGTDCPELSPFILDLAFRKLDACDVVLGPARDGGFYLAALKQPFPELFLGRTWS
TSSVLNDSQRIIREHGRSCDLLPALSDIDTFDDLRASGLWTP
>Mature_202_residues
MKSRNDELLIIFSKNPVAGRVKTRLASAIGDAEALRIYEQLRELTKQATTGINASKAIAYSDFIPNTDLLLAPDTEAWLQ
QGSDLGERMHRAFVKGFSLGFSRVALIGTDCPELSPFILDLAFRKLDACDVVLGPARDGGFYLAALKQPFPELFLGRTWS
TSSVLNDSQRIIREHGRSCDLLPALSDIDTFDDLRASGLWTP

Specific function: Unknown

COG id: COG3222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22275; Mature: 22275

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRNDELLIIFSKNPVAGRVKTRLASAIGDAEALRIYEQLRELTKQATTGINASKAIAY
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEE
SDFIPNTDLLLAPDTEAWLQQGSDLGERMHRAFVKGFSLGFSRVALIGTDCPELSPFILD
CCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHH
LAFRKLDACDVVLGPARDGGFYLAALKQPFPELFLGRTWSTSSVLNDSQRIIREHGRSCD
HHHHHCCCCCEEECCCCCCCEEEEEHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LLPALSDIDTFDDLRASGLWTP
CCCCHHHCCHHHHHHHCCCCCC
>Mature Secondary Structure
MKSRNDELLIIFSKNPVAGRVKTRLASAIGDAEALRIYEQLRELTKQATTGINASKAIAY
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEE
SDFIPNTDLLLAPDTEAWLQQGSDLGERMHRAFVKGFSLGFSRVALIGTDCPELSPFILD
CCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHH
LAFRKLDACDVVLGPARDGGFYLAALKQPFPELFLGRTWSTSSVLNDSQRIIREHGRSCD
HHHHHCCCCCEEECCCCCCCEEEEEHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LLPALSDIDTFDDLRASGLWTP
CCCCHHHCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA