Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674096

Identifier: 21674096

GI number: 21674096

Start: 1191815

End: 1193056

Strand: Reverse

Name: 21674096

Synonym: CT1273

Alternate gene names: NA

Gene position: 1193056-1191815 (Counterclockwise)

Preceding gene: 21674098

Following gene: 21674092

Centisome position: 55.36

GC content: 59.58

Gene sequence:

>1242_bases
ATGAAGCCCATCCGCATTGACGATTACTGTTTCGACCGTATCCATCTCTGGTTGCAGTACGACCCTTTCGTGCCCGAGTT
TATCGAGATGGTGATCGAGGTGTTTTATCCGGCGAACCGCAAGGCCAATGGTCTGGTGATGTTCAACCACGGCTTCCTGA
TTGGCAACGACCTGCTCTGGTATCCCAAGAAGATTGCCGGTATGCTGCTCGACGACAATCCGCTTTTTGGCATCAATCCG
TCCGCTTACTACAATTACAGCGAGGCGATTGTCGAGAAGAACTGGGCGATGGCATTCGTCAGCGCCAGCCATGCGCAGGT
TGACTGGATGCCGTGGACCGACATCGGCGGCAATCCGAGGGTTGGGCAGGAGACCTTTGCCGCCGCATCATATCTGATCC
GCTATGGCCTGACCGAATTCTTCTGGCTGGCCGAGTCCAGGGGACATAACAGCAAGAATTTTGATGCCCAGCTCGCCAGC
AAGGCGAAGTTTCTGGTCTCCAACAACGTCATTTTCGCCGGGCACTCGGTTGGCGGCGCGCATGCGCAGGCCGCGGCGTG
CGGCTTCGATACCCTCAGTCAGATCGGGCGCCAGCAGTGTCGCCCCTTCAATCCGGTGATCTACAACCGGGAGCTTCTGC
CGACGTTCAGTATGCCGATGACCGATTGGCCTGAAGCGGATCGGGCCAATCCGGTCGGCCTCCTGATGCTCTCACCGGTT
GACCAGCATGTGCCGATCTTCATGCCCGGCATGAGCGACTACCGCGCGGCGCTCGCATCCCGCCAGATGCCGATGGCGAT
GGTTGTCGGCCAGTGCGATTGCGCGTGTCTTGATATGTCCCAGCCGCCCGCCTGGTCGGGCACTCCCGGTGTCGAAAGCC
AGTTCAGCCAGCTCACCGGCGACGGTTCCTGGGTCGTGGCTTCGCAGGTTGAGCGCGGCAGCCATTGCGGTTACCTGACC
AACAAGAGCCCGCTGTGCAGCGTGGCTGAACTGCCGAGCCAGTGCAAACGCTGCCCTGGCGTCGAGGTGTACAAGCCGAT
GGGCGCGGAAACGGCCTTTACAGCGGAGATGCTTGGGAAGTTCATCAATCTTTATCCGAATGGCGGCGGATTCGAGGGCG
GTTTCAACGACTGGATTGGCAGCGAGTTCATCACCTGGCTGAACCGGCAAAGCCCGTGCTGCGATCTCAATCTGATGCCA
ATGCCGGGCGGAGGCTACATCGACAACGTGCCGCCGGCTTAG

Upstream 100 bases:

>100_bases
ACTTTATGAAAATGCCGTAGCAAATTGTGTTAACGGCCAATCTTTTTCCTGCCACGGTTTTCTGTTCACGATAGTTCTAA
ACGCTCTTCCCCCTATCGTT

Downstream 100 bases:

>100_bases
CGCTGAGTGCGGACAGCTTGAAACAGAAAAGGCCGGGAGTTGACGTTCCGGCCTTTCTTTTTTTCGCTTTGAATTTTTTC
AGACGCTGGTGTTTTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKPIRIDDYCFDRIHLWLQYDPFVPEFIEMVIEVFYPANRKANGLVMFNHGFLIGNDLLWYPKKIAGMLLDDNPLFGINP
SAYYNYSEAIVEKNWAMAFVSASHAQVDWMPWTDIGGNPRVGQETFAAASYLIRYGLTEFFWLAESRGHNSKNFDAQLAS
KAKFLVSNNVIFAGHSVGGAHAQAAACGFDTLSQIGRQQCRPFNPVIYNRELLPTFSMPMTDWPEADRANPVGLLMLSPV
DQHVPIFMPGMSDYRAALASRQMPMAMVVGQCDCACLDMSQPPAWSGTPGVESQFSQLTGDGSWVVASQVERGSHCGYLT
NKSPLCSVAELPSQCKRCPGVEVYKPMGAETAFTAEMLGKFINLYPNGGGFEGGFNDWIGSEFITWLNRQSPCCDLNLMP
MPGGGYIDNVPPA

Sequences:

>Translated_413_residues
MKPIRIDDYCFDRIHLWLQYDPFVPEFIEMVIEVFYPANRKANGLVMFNHGFLIGNDLLWYPKKIAGMLLDDNPLFGINP
SAYYNYSEAIVEKNWAMAFVSASHAQVDWMPWTDIGGNPRVGQETFAAASYLIRYGLTEFFWLAESRGHNSKNFDAQLAS
KAKFLVSNNVIFAGHSVGGAHAQAAACGFDTLSQIGRQQCRPFNPVIYNRELLPTFSMPMTDWPEADRANPVGLLMLSPV
DQHVPIFMPGMSDYRAALASRQMPMAMVVGQCDCACLDMSQPPAWSGTPGVESQFSQLTGDGSWVVASQVERGSHCGYLT
NKSPLCSVAELPSQCKRCPGVEVYKPMGAETAFTAEMLGKFINLYPNGGGFEGGFNDWIGSEFITWLNRQSPCCDLNLMP
MPGGGYIDNVPPA
>Mature_413_residues
MKPIRIDDYCFDRIHLWLQYDPFVPEFIEMVIEVFYPANRKANGLVMFNHGFLIGNDLLWYPKKIAGMLLDDNPLFGINP
SAYYNYSEAIVEKNWAMAFVSASHAQVDWMPWTDIGGNPRVGQETFAAASYLIRYGLTEFFWLAESRGHNSKNFDAQLAS
KAKFLVSNNVIFAGHSVGGAHAQAAACGFDTLSQIGRQQCRPFNPVIYNRELLPTFSMPMTDWPEADRANPVGLLMLSPV
DQHVPIFMPGMSDYRAALASRQMPMAMVVGQCDCACLDMSQPPAWSGTPGVESQFSQLTGDGSWVVASQVERGSHCGYLT
NKSPLCSVAELPSQCKRCPGVEVYKPMGAETAFTAEMLGKFINLYPNGGGFEGGFNDWIGSEFITWLNRQSPCCDLNLMP
MPGGGYIDNVPPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45720; Mature: 45720

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIRIDDYCFDRIHLWLQYDPFVPEFIEMVIEVFYPANRKANGLVMFNHGFLIGNDLLW
CCCCCCCHHHEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEE
YPKKIAGMLLDDNPLFGINPSAYYNYSEAIVEKNWAMAFVSASHAQVDWMPWTDIGGNPR
CCHHHCCEEECCCCCCCCCCHHHCCHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCCC
VGQETFAAASYLIRYGLTEFFWLAESRGHNSKNFDAQLASKAKFLVSNNVIFAGHSVGGA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCEEEEECCCCCC
HAQAAACGFDTLSQIGRQQCRPFNPVIYNRELLPTFSMPMTDWPEADRANPVGLLMLSPV
HHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DQHVPIFMPGMSDYRAALASRQMPMAMVVGQCDCACLDMSQPPAWSGTPGVESQFSQLTG
CCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCC
DGSWVVASQVERGSHCGYLTNKSPLCSVAELPSQCKRCPGVEVYKPMGAETAFTAEMLGK
CCCEEEEEHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
FINLYPNGGGFEGGFNDWIGSEFITWLNRQSPCCDLNLMPMPGGGYIDNVPPA
HHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKPIRIDDYCFDRIHLWLQYDPFVPEFIEMVIEVFYPANRKANGLVMFNHGFLIGNDLLW
CCCCCCCHHHEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEE
YPKKIAGMLLDDNPLFGINPSAYYNYSEAIVEKNWAMAFVSASHAQVDWMPWTDIGGNPR
CCHHHCCEEECCCCCCCCCCHHHCCHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCCC
VGQETFAAASYLIRYGLTEFFWLAESRGHNSKNFDAQLASKAKFLVSNNVIFAGHSVGGA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCEEEEECCCCCC
HAQAAACGFDTLSQIGRQQCRPFNPVIYNRELLPTFSMPMTDWPEADRANPVGLLMLSPV
HHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DQHVPIFMPGMSDYRAALASRQMPMAMVVGQCDCACLDMSQPPAWSGTPGVESQFSQLTG
CCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCC
DGSWVVASQVERGSHCGYLTNKSPLCSVAELPSQCKRCPGVEVYKPMGAETAFTAEMLGK
CCCEEEEEHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
FINLYPNGGGFEGGFNDWIGSEFITWLNRQSPCCDLNLMPMPGGGYIDNVPPA
HHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA