| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is hisC
Identifier: 21674079
GI number: 21674079
Start: 1180157
End: 1181203
Strand: Reverse
Name: hisC
Synonym: CT1256
Alternate gene names: 21674079
Gene position: 1181203-1180157 (Counterclockwise)
Preceding gene: 21674085
Following gene: 21674078
Centisome position: 54.81
GC content: 57.21
Gene sequence:
>1047_bases ATGCTCAATCCTGCCCTGGAGCATATCGAGACTTATAAGGTCGAGGGTGGCCAGGAGGCTGAGGTCAAGCTGAACCAGAA CGAGAACCCCTTCGATCTGCCCTCGTGGCTCAAGGACAAGATTCTCGACCAGTTCCGCCATGAGCCCTGGAACCGCTATC CGGATATTCTGCCGTACCGGGGCATGGCGGCCTATGCATCGTTTCTCGGCGTGAAGCCGGAGTTGGTGATCATGAGCAAT GGTTCGAACGAGATGCTCTACACCATCTTCATGGCCTGCCTCGGCGCTGGTCGCAAGGTGCTTATTCCAGAGCCTTCGTT TTCGCTTTACGACAAGCTTGCACGTCTTCAGCAGGCTGGGGTTGTCGAGGTGCCGATGCATGACGATCTCTCCTTTGACG TCGATGCGATCATCGAAGCCGCCAGGCGCGAGAAGGTCGATTTTATCGTGCTCTCCACGCCGAACAATCCGACCAGCAAG TCGCTGTCCCACGACGAGATCGAACGCATTGTCGAAGCTGCCGACGCCATTGTGCTGGTCGATGAAGCGTATGTCGAGTT TTCGCGTGAGCAATCGGCGCTCGACCTGATCGACCGCTACCCGAACCTGATCGTGTTGCGCACCATGTCCAAGGCGCTTG CGCTGGCCGGAATGCGTATCGGCTTTGCGATTGCCAATCCGGAGCTGCTGGCCGAAATCTCCAAGCCGAAGATTCCCTTC GCGTCGAGCCGACTGGCGGAAATCACTCTCATGGCTGTGCTCGAAAACTACTCACTCGTGACCGACGCCGTGCAGTACAT CCTCGCCGAGCGCGGGCGCATCGAGGCGGAGCTGACAGAAATTCCTGGCATCCATACCTTCGAGAGCGACACCAACTTCC TCATCATTCGCGTCGCCAACGCATCCGAGGTGTTCAGGAAGCTCAAAAATGCCGGAGTGCTGGTTCGGAACGTGTCGGGA TACCCGCTTATGGAGAACTGCCTCCGCTTCAATGTTGGTCTCAGGGAGGAGAACGACCGCCTGTTGGAACTGCTGAAAAA GCTCTGA
Upstream 100 bases:
>100_bases TCGTTTCTTGGATGGTGTTGCGACCAGTTTTATACTGGCACCACCTCTTAAGACGTCGAAAACCGGTAAATCAAGCATCA TGAAAAGAGATCTCAGGACC
Downstream 100 bases:
>100_bases GATGTCGGGTTTCAGGCAGTTGACGGGAGACGAGATGGGGCGGCTGACGCCCGAGGCCTATGCTGATTCAGCGCGGCATC CGGTGACGCTCATGCTGTAC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLNPALEHIETYKVEGGQEAEVKLNQNENPFDLPSWLKDKILDQFRHEPWNRYPDILPYRGMAAYASFLGVKPELVIMSN GSNEMLYTIFMACLGAGRKVLIPEPSFSLYDKLARLQQAGVVEVPMHDDLSFDVDAIIEAARREKVDFIVLSTPNNPTSK SLSHDEIERIVEAADAIVLVDEAYVEFSREQSALDLIDRYPNLIVLRTMSKALALAGMRIGFAIANPELLAEISKPKIPF ASSRLAEITLMAVLENYSLVTDAVQYILAERGRIEAELTEIPGIHTFESDTNFLIIRVANASEVFRKLKNAGVLVRNVSG YPLMENCLRFNVGLREENDRLLELLKKL
Sequences:
>Translated_348_residues MLNPALEHIETYKVEGGQEAEVKLNQNENPFDLPSWLKDKILDQFRHEPWNRYPDILPYRGMAAYASFLGVKPELVIMSN GSNEMLYTIFMACLGAGRKVLIPEPSFSLYDKLARLQQAGVVEVPMHDDLSFDVDAIIEAARREKVDFIVLSTPNNPTSK SLSHDEIERIVEAADAIVLVDEAYVEFSREQSALDLIDRYPNLIVLRTMSKALALAGMRIGFAIANPELLAEISKPKIPF ASSRLAEITLMAVLENYSLVTDAVQYILAERGRIEAELTEIPGIHTFESDTNFLIIRVANASEVFRKLKNAGVLVRNVSG YPLMENCLRFNVGLREENDRLLELLKKL >Mature_348_residues MLNPALEHIETYKVEGGQEAEVKLNQNENPFDLPSWLKDKILDQFRHEPWNRYPDILPYRGMAAYASFLGVKPELVIMSN GSNEMLYTIFMACLGAGRKVLIPEPSFSLYDKLARLQQAGVVEVPMHDDLSFDVDAIIEAARREKVDFIVLSTPNNPTSK SLSHDEIERIVEAADAIVLVDEAYVEFSREQSALDLIDRYPNLIVLRTMSKALALAGMRIGFAIANPELLAEISKPKIPF ASSRLAEITLMAVLENYSLVTDAVQYILAERGRIEAELTEIPGIHTFESDTNFLIIRVANASEVFRKLKNAGVLVRNVSG YPLMENCLRFNVGLREENDRLLELLKKL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=336, Percent_Identity=32.7380952380952, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1788722, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994476, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71994472, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17567369, Length=186, Percent_Identity=27.9569892473118, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=327, Percent_Identity=31.4984709480122, Blast_Score=133, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_CHLTE (Q8KD01)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662144.1 - ProteinModelPortal: Q8KD01 - SMR: Q8KD01 - GeneID: 1006613 - GenomeReviews: AE006470_GR - KEGG: cte:CT1256 - NMPDR: fig|194439.1.peg.1238 - TIGR: CT1256 - HOGENOM: HBG646350 - OMA: RDFSKEP - ProtClustDB: CLSK637673 - BioCyc: CTEP194439:CT_1256-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39183; Mature: 39183
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPALEHIETYKVEGGQEAEVKLNQNENPFDLPSWLKDKILDQFRHEPWNRYPDILPYR CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GMAAYASFLGVKPELVIMSNGSNEMLYTIFMACLGAGRKVLIPEPSFSLYDKLARLQQAG CHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC VVEVPMHDDLSFDVDAIIEAARREKVDFIVLSTPNNPTSKSLSHDEIERIVEAADAIVLV EEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEE DEAYVEFSREQSALDLIDRYPNLIVLRTMSKALALAGMRIGFAIANPELLAEISKPKIPF EHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCCCC ASSRLAEITLMAVLENYSLVTDAVQYILAERGRIEAELTEIPGIHTFESDTNFLIIRVAN CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECCCCCEEEEEECC ASEVFRKLKNAGVLVRNVSGYPLMENCLRFNVGLREENDRLLELLKKL HHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MLNPALEHIETYKVEGGQEAEVKLNQNENPFDLPSWLKDKILDQFRHEPWNRYPDILPYR CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GMAAYASFLGVKPELVIMSNGSNEMLYTIFMACLGAGRKVLIPEPSFSLYDKLARLQQAG CHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC VVEVPMHDDLSFDVDAIIEAARREKVDFIVLSTPNNPTSKSLSHDEIERIVEAADAIVLV EEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEE DEAYVEFSREQSALDLIDRYPNLIVLRTMSKALALAGMRIGFAIANPELLAEISKPKIPF EHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCCCC ASSRLAEITLMAVLENYSLVTDAVQYILAERGRIEAELTEIPGIHTFESDTNFLIIRVAN CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECCCCCEEEEEECC ASEVFRKLKNAGVLVRNVSGYPLMENCLRFNVGLREENDRLLELLKKL HHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901