| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674008
Identifier: 21674008
GI number: 21674008
Start: 1112045
End: 1112392
Strand: Reverse
Name: 21674008
Synonym: CT1182
Alternate gene names: NA
Gene position: 1112392-1112045 (Counterclockwise)
Preceding gene: 21674012
Following gene: 21674007
Centisome position: 51.62
GC content: 48.85
Gene sequence:
>348_bases ATGTCTCTGGAACCATCGAAAGACAAAAAGGATTACAATCATCAGCTTCTCGACAAGGTTATTCATGCGAGAATTCGCTT TGCAGCACTGGCTTATCTGATGAGCGTCCCTGAAGCATCGTTCGTTGACATTCGCGACAGTATCAGAGCTACGGATGGAA ATCTCAGTATTCACCTGAGAAAACTTGAAGCGGCCAGGTATGTGGAGTGCATGAAGAGTTTCGAGAGCCGCAAGCCTTTG ACCAATTACCGGGTGACCAGCGAGGGCCGGGAGGCTTTTGCCCGGTATCTCAGAAATGTGGAGAAATTCTGTGAAGATAT GCCGGATTTGCAAGTGCAGACGGCCTGA
Upstream 100 bases:
>100_bases TTTTGTTGCTTCGCTTGCTCTTGATCGAAAAAAAAAGTACTCTTATTTGTATACGACGTCAAGTCTCCTTAGTAACCGTT GAAATAATTTAAAAGAAAGA
Downstream 100 bases:
>100_bases TTCCCCTTTTTTGGGTTAAGTTCAGTTATTGCAAATCCTTTCGCGTTCTGCTGATGTCCTGAAATTATCGGATTCCGTCC GTCCGATTATTTCTGTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: PAS/PAC Sensor Protein; MarR/EmrR Family Transcriptional Regulator; ArsR Family Transcriptional Regulator; Regulatory Protein Arsr; Transcriptional Regulator MarR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; MarR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcriptional Regulator MarR/EmrR
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSLEPSKDKKDYNHQLLDKVIHARIRFAALAYLMSVPEASFVDIRDSIRATDGNLSIHLRKLEAARYVECMKSFESRKPL TNYRVTSEGREAFARYLRNVEKFCEDMPDLQVQTA
Sequences:
>Translated_115_residues MSLEPSKDKKDYNHQLLDKVIHARIRFAALAYLMSVPEASFVDIRDSIRATDGNLSIHLRKLEAARYVECMKSFESRKPL TNYRVTSEGREAFARYLRNVEKFCEDMPDLQVQTA >Mature_114_residues SLEPSKDKKDYNHQLLDKVIHARIRFAALAYLMSVPEASFVDIRDSIRATDGNLSIHLRKLEAARYVECMKSFESRKPLT NYRVTSEGREAFARYLRNVEKFCEDMPDLQVQTA
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13356; Mature: 13225
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEPSKDKKDYNHQLLDKVIHARIRFAALAYLMSVPEASFVDIRDSIRATDGNLSIHLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHH KLEAARYVECMKSFESRKPLTNYRVTSEGREAFARYLRNVEKFCEDMPDLQVQTA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure SLEPSKDKKDYNHQLLDKVIHARIRFAALAYLMSVPEASFVDIRDSIRATDGNLSIHLR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHH KLEAARYVECMKSFESRKPLTNYRVTSEGREAFARYLRNVEKFCEDMPDLQVQTA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA