| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673899
Identifier: 21673899
GI number: 21673899
Start: 1013457
End: 1014659
Strand: Direct
Name: 21673899
Synonym: CT1073
Alternate gene names: NA
Gene position: 1013457-1014659 (Clockwise)
Preceding gene: 21673898
Following gene: 21673900
Centisome position: 47.03
GC content: 58.1
Gene sequence:
>1203_bases ATGCGGATGCAATTGAAAAACAGATCGAAAATGGCGACGGCGCTGCTCGCCAGTGCCACCATGCTGCTGCCTTCGGCAAA AAATGCCTTGGCCGACGCTGCTCCTGAAGAGGGAATCTTCAGCCTGAAATATCTGAACTATCACGACACTCAGACGGGCG ATACCAACCTGACAGCGGGGATGTCGATGGATCGCATGACGGTCAACGCCTTGTCTTTCTACGGTATGGTGCCGATTGCA GGCAAGTGGTCAATCGCGGGCACCTTCATCGAAGATTCGGTCACCGGAGCCTCTCCGGCTTACCACGGCTGGGGGTTTCC ATCAGAGAGCAAAAACGACAGCACCTCCGGGGCATCGGGCGAGCTGCGACACGCTGGCGACATCAGCGTTACCCGCTACT TTTCGCGAGGGACGCTCAGCCTCGGCACGAGCTACTCGCAGGAGTCCGACTACATTTCTCGAGGCCTTTCGCTTAACGGC ACGCTCTCTACCGAGAACAAGAATACCACCTTCAGCCTCGGGGCCGCCTACAGCAGCGATACGGTTTATCTCGACAAACC GGCGGTCATCGAGTCAAAGCAGAGCGACACACCGGGGCGCAAGCGCATCGTCTCCGTACTGCTCGGCGTGACGCAGGTGA TGTCGCAGAATGACGTCATGCAGGTGACCGCCACGTACACGCACGGCGATGGCTATTACAGTGATCCCTACAAGGACCCG GATCTCCGGCCCGGCAAAAGGCGGATGTTCACCCTCATGACCCGCTGGAACCACCACTTCGACGGGCCGGATGGCACAGC GCGGCTGTCGTATCGTTACTATACCGACACTTTCGGTATCGAGGCGCATACCTTCACGGCTGAGTACATCCAGCCACTGC CGCATGGTTGGGAGATCACACCGACGGTGAGGTACTATTCGCAAAGCTCCGCCAGATTCTACGTGCCGACAGAGGACGAT CCGCGGGCAAAGACCCCGACGGACGGCATGGAGTATTACTCCGAAGATCAGCGTCTATCTGCCTTTGGAGCATTCAGTTA CGGCGTGAAGGTACTCAAAGAGCTTGGCTGGAGCTGGAGCGCCGACGTGAAGTATGAGCACTGTGAGCAGCGCTACGACT GGGGCATTAACGGCCACGGCGATCCCGGCATTCCGGCATTCAGCTTCAGAAGCCTTCAGGTCGGTCTTTCGCGCAAGTTC TGA
Upstream 100 bases:
>100_bases AAATGACCTTCGACCGCGACGCGCTCGACGCACACTACACCGAGCATATCTATAGCAGCAAGGAGGCCGCGTCTGGCGGC TCCGGAGTTGGCGGCGGAGG
Downstream 100 bases:
>100_bases GTCCGTGAAAAGTGGAAAAGATGCGCTATTGATGTAATTTGCCGTTCATATGCACAGATTCGGATTCAGGGCGATGGGCA GCGGATGCGAAATCGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MRMQLKNRSKMATALLASATMLLPSAKNALADAAPEEGIFSLKYLNYHDTQTGDTNLTAGMSMDRMTVNALSFYGMVPIA GKWSIAGTFIEDSVTGASPAYHGWGFPSESKNDSTSGASGELRHAGDISVTRYFSRGTLSLGTSYSQESDYISRGLSLNG TLSTENKNTTFSLGAAYSSDTVYLDKPAVIESKQSDTPGRKRIVSVLLGVTQVMSQNDVMQVTATYTHGDGYYSDPYKDP DLRPGKRRMFTLMTRWNHHFDGPDGTARLSYRYYTDTFGIEAHTFTAEYIQPLPHGWEITPTVRYYSQSSARFYVPTEDD PRAKTPTDGMEYYSEDQRLSAFGAFSYGVKVLKELGWSWSADVKYEHCEQRYDWGINGHGDPGIPAFSFRSLQVGLSRKF
Sequences:
>Translated_400_residues MRMQLKNRSKMATALLASATMLLPSAKNALADAAPEEGIFSLKYLNYHDTQTGDTNLTAGMSMDRMTVNALSFYGMVPIA GKWSIAGTFIEDSVTGASPAYHGWGFPSESKNDSTSGASGELRHAGDISVTRYFSRGTLSLGTSYSQESDYISRGLSLNG TLSTENKNTTFSLGAAYSSDTVYLDKPAVIESKQSDTPGRKRIVSVLLGVTQVMSQNDVMQVTATYTHGDGYYSDPYKDP DLRPGKRRMFTLMTRWNHHFDGPDGTARLSYRYYTDTFGIEAHTFTAEYIQPLPHGWEITPTVRYYSQSSARFYVPTEDD PRAKTPTDGMEYYSEDQRLSAFGAFSYGVKVLKELGWSWSADVKYEHCEQRYDWGINGHGDPGIPAFSFRSLQVGLSRKF >Mature_400_residues MRMQLKNRSKMATALLASATMLLPSAKNALADAAPEEGIFSLKYLNYHDTQTGDTNLTAGMSMDRMTVNALSFYGMVPIA GKWSIAGTFIEDSVTGASPAYHGWGFPSESKNDSTSGASGELRHAGDISVTRYFSRGTLSLGTSYSQESDYISRGLSLNG TLSTENKNTTFSLGAAYSSDTVYLDKPAVIESKQSDTPGRKRIVSVLLGVTQVMSQNDVMQVTATYTHGDGYYSDPYKDP DLRPGKRRMFTLMTRWNHHFDGPDGTARLSYRYYTDTFGIEAHTFTAEYIQPLPHGWEITPTVRYYSQSSARFYVPTEDD PRAKTPTDGMEYYSEDQRLSAFGAFSYGVKVLKELGWSWSADVKYEHCEQRYDWGINGHGDPGIPAFSFRSLQVGLSRKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44440; Mature: 44440
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMQLKNRSKMATALLASATMLLPSAKNALADAAPEEGIFSLKYLNYHDTQTGDTNLTAG CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEECC MSMDRMTVNALSFYGMVPIAGKWSIAGTFIEDSVTGASPAYHGWGFPSESKNDSTSGASG CCCCCEEHHHHHHHCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ELRHAGDISVTRYFSRGTLSLGTSYSQESDYISRGLSLNGTLSTENKNTTFSLGAAYSSD CCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCEEECCCCCCEEEEEEECCCC TVYLDKPAVIESKQSDTPGRKRIVSVLLGVTQVMSQNDVMQVTATYTHGDGYYSDPYKDP EEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCC DLRPGKRRMFTLMTRWNHHFDGPDGTARLSYRYYTDTFGIEAHTFTAEYIQPLPHGWEIT CCCCCHHHHEEEEHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHHCCCCCCEEC PTVRYYSQSSARFYVPTEDDPRAKTPTDGMEYYSEDQRLSAFGAFSYGVKVLKELGWSWS EEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC ADVKYEHCEQRYDWGINGHGDPGIPAFSFRSLQVGLSRKF CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MRMQLKNRSKMATALLASATMLLPSAKNALADAAPEEGIFSLKYLNYHDTQTGDTNLTAG CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEECC MSMDRMTVNALSFYGMVPIAGKWSIAGTFIEDSVTGASPAYHGWGFPSESKNDSTSGASG CCCCCEEHHHHHHHCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ELRHAGDISVTRYFSRGTLSLGTSYSQESDYISRGLSLNGTLSTENKNTTFSLGAAYSSD CCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCEEECCCCCCEEEEEEECCCC TVYLDKPAVIESKQSDTPGRKRIVSVLLGVTQVMSQNDVMQVTATYTHGDGYYSDPYKDP EEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCC DLRPGKRRMFTLMTRWNHHFDGPDGTARLSYRYYTDTFGIEAHTFTAEYIQPLPHGWEIT CCCCCHHHHEEEEHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHHCCCCCCEEC PTVRYYSQSSARFYVPTEDDPRAKTPTDGMEYYSEDQRLSAFGAFSYGVKVLKELGWSWS EEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC ADVKYEHCEQRYDWGINGHGDPGIPAFSFRSLQVGLSRKF CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA