Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ybjT [C]

Identifier: 21673889

GI number: 21673889

Start: 999779

End: 1000813

Strand: Direct

Name: ybjT [C]

Synonym: CT1063

Alternate gene names: 21673889

Gene position: 999779-1000813 (Clockwise)

Preceding gene: 21673886

Following gene: 21673890

Centisome position: 46.39

GC content: 56.81

Gene sequence:

>1035_bases
ATGTCATCTTCGTCTGTACTGGCTGAATCCTGTAACGGCTCTCAGAAAAAGCGCGTGTTCGTGGTGGGAGCGACCGGGTA
TATCGGCAAGTTTGTTGTCCGCGAGCTGGTTTCAAGAGGCTATGAGGTCATCAGTTTCGCCCGTCCGCGATCCGGCGTGA
ACGCATCGACTACCGAGGATGAGACCCGTCGGCAACTTCAGGGTTCCGAGGTGCGTTTCGGCGATGTGTCGAATTTGGAG
TCGCTCTTGCGCGATGGCATCCGGGGCGAGCATTTCGATGCGGTGGTCTCGTGCCTGGCCTCGCGCAACGGAGGGATCAA
AGATTCGTGGGACATCGATTACCAGGCGACGCGCAATTCGCTCGATGCCGGAATGAAGGCAGGAATCAACCATTTCGTGC
TGCTTTCGGCGATCTGCGTGCAGAAGCCGATGCTGGAGTTTCAGCGTGCCAAGCTGAAGTTCGAAAAGGAGTTGCGCGAG
TCTGGCGTGACCTACTCCATTGTCAGGCCAACGGCGTTTTTCAAGTCGATTGCCGGGCAGATCGAGAAGGTCAAAAACGG
CAAGCCTTATGTTATGTTCGGGGATGGCAAACTCACGGCGTGCAAGCCGATCAGCGAAGGTGATCTGGCCCGCTTCATCA
CCGACTGCCTCGAAGATCCGGAGAAACAGAACAAGATTCTGCCCATCGGTGGGCCGGGCGAGCCGGTGACCAACCTCGAT
CAGGCGCTGATGCTCTTCGAGCTGCTTGGCCGGAAGCCGAAGCTCAAGAAGGTGCCGATCCAGATATTCGACGTGATTAT
TCCGTTGCTGACGCTGATCTCGAAGTTCCTGCCGTCATTTGCAGAAAAAGCGGAGTTCGCTCGTATTGGCAAATACTACT
GCTCGGAGTCGATGCTGGTGTGGGATCCGGTCAAAAAACGTTATGACGCCGACGCTACGCCCTCATACGGCACCGAAACC
CTGCGCGACTTCTACAAACGCGTGCTCAAGGAGGGGCTCGCCGGTCAGGAACTCGGCGCGCACGCGATGTTCTGA

Upstream 100 bases:

>100_bases
TTCAAATCCCCTCAAACAGTTTCAAAACAATGATTTTAGCCTTATACTTGTTCTGGACAGCGATTTCCGGTTTTCAATCA
ACCTTTACTGGCTATTGGTT

Downstream 100 bases:

>100_bases
GGCGGCATAAAGCCTCTTTGCCATGATGACTCGCTCCGCGCTTGACTTCCTCGTGGAACTCAAAGCCAACAACAACCGGG
AGTGGTTCGAGGCGAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NmrA-Like Family; NAD Dependent Epimerase/Dehydratase Family Protein; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH Dehydrogenase; Nucleoside-Diphosphate-Sugar Epimerase; 3 8-Divinyl Protochlorophyllide A 8-Vinyl Reductase; Homolog NADH Dehydrogenase; Glucose/Sorbosone Dehydrogenase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSSSSVLAESCNGSQKKRVFVVGATGYIGKFVVRELVSRGYEVISFARPRSGVNASTTEDETRRQLQGSEVRFGDVSNLE
SLLRDGIRGEHFDAVVSCLASRNGGIKDSWDIDYQATRNSLDAGMKAGINHFVLLSAICVQKPMLEFQRAKLKFEKELRE
SGVTYSIVRPTAFFKSIAGQIEKVKNGKPYVMFGDGKLTACKPISEGDLARFITDCLEDPEKQNKILPIGGPGEPVTNLD
QALMLFELLGRKPKLKKVPIQIFDVIIPLLTLISKFLPSFAEKAEFARIGKYYCSESMLVWDPVKKRYDADATPSYGTET
LRDFYKRVLKEGLAGQELGAHAMF

Sequences:

>Translated_344_residues
MSSSSVLAESCNGSQKKRVFVVGATGYIGKFVVRELVSRGYEVISFARPRSGVNASTTEDETRRQLQGSEVRFGDVSNLE
SLLRDGIRGEHFDAVVSCLASRNGGIKDSWDIDYQATRNSLDAGMKAGINHFVLLSAICVQKPMLEFQRAKLKFEKELRE
SGVTYSIVRPTAFFKSIAGQIEKVKNGKPYVMFGDGKLTACKPISEGDLARFITDCLEDPEKQNKILPIGGPGEPVTNLD
QALMLFELLGRKPKLKKVPIQIFDVIIPLLTLISKFLPSFAEKAEFARIGKYYCSESMLVWDPVKKRYDADATPSYGTET
LRDFYKRVLKEGLAGQELGAHAMF
>Mature_343_residues
SSSSVLAESCNGSQKKRVFVVGATGYIGKFVVRELVSRGYEVISFARPRSGVNASTTEDETRRQLQGSEVRFGDVSNLES
LLRDGIRGEHFDAVVSCLASRNGGIKDSWDIDYQATRNSLDAGMKAGINHFVLLSAICVQKPMLEFQRAKLKFEKELRES
GVTYSIVRPTAFFKSIAGQIEKVKNGKPYVMFGDGKLTACKPISEGDLARFITDCLEDPEKQNKILPIGGPGEPVTNLDQ
ALMLFELLGRKPKLKKVPIQIFDVIIPLLTLISKFLPSFAEKAEFARIGKYYCSESMLVWDPVKKRYDADATPSYGTETL
RDFYKRVLKEGLAGQELGAHAMF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38189; Mature: 38058

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSVLAESCNGSQKKRVFVVGATGYIGKFVVRELVSRGYEVISFARPRSGVNASTTED
CCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHH
ETRRQLQGSEVRFGDVSNLESLLRDGIRGEHFDAVVSCLASRNGGIKDSWDIDYQATRNS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LDAGMKAGINHFVLLSAICVQKPMLEFQRAKLKFEKELRESGVTYSIVRPTAFFKSIAGQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
IEKVKNGKPYVMFGDGKLTACKPISEGDLARFITDCLEDPEKQNKILPIGGPGEPVTNLD
HHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHCCCEEECCCCCCCHHHHH
QALMLFELLGRKPKLKKVPIQIFDVIIPLLTLISKFLPSFAEKAEFARIGKYYCSESMLV
HHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WDPVKKRYDADATPSYGTETLRDFYKRVLKEGLAGQELGAHAMF
ECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSSSVLAESCNGSQKKRVFVVGATGYIGKFVVRELVSRGYEVISFARPRSGVNASTTED
CCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHH
ETRRQLQGSEVRFGDVSNLESLLRDGIRGEHFDAVVSCLASRNGGIKDSWDIDYQATRNS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LDAGMKAGINHFVLLSAICVQKPMLEFQRAKLKFEKELRESGVTYSIVRPTAFFKSIAGQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHH
IEKVKNGKPYVMFGDGKLTACKPISEGDLARFITDCLEDPEKQNKILPIGGPGEPVTNLD
HHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHCCCEEECCCCCCCHHHHH
QALMLFELLGRKPKLKKVPIQIFDVIIPLLTLISKFLPSFAEKAEFARIGKYYCSESMLV
HHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WDPVKKRYDADATPSYGTETLRDFYKRVLKEGLAGQELGAHAMF
ECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA